RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PNMA8CA0A1B0GUJ8 204 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ZMPSTE24O75844 475 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CACUL1Q86Y37 369 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF75CPQ92670 426 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 RHBGQ9H310 441 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 DMGDHQ9UI17 866 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 LRPAP1P30533 357 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PRKAA1Q13131 559 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CCNG2Q16589 344 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 IL27RAQ6UWB1 636 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CAVIN3Q969G5 261 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CHID1Q9BWS9 393 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PACSIN3Q9UKS6 424 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 H7C4K7 107 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 BIRC5O15392 142 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ACADMP11310 421 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 R3HCC1LQ7Z5L2 792 aaKnown RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 THAP1Q9NVV9 213 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 RABGEF1Q9UJ41 708 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 KRT6AP02538 564 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CKBP12277 381 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 DNAJB2P25686 324 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ADSLP30566 484 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-203ENST00000359759 POLD2P49005 469 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ITGA1P56199 1179 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 TCEA2Q15560 299 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 EXOC3L1Q86VI1 746 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 ZDHHC13Q8IUH4 622 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 VTI1BQ9UEU0 232 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 L1RE1Q9UN81 338 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 LRCH1Q9Y2L9 728 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 CRYL1Q9Y2S2 319 aa16.35■□□□□ 0.21
COL18A1-203ENST00000359759 BTN3A1O00481 513 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 PROSCO94903 275 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 RPA3P35244 121 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-203ENST00000359759 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 STX12Q86Y82 276 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 OGTO15294 1046 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 ME2P23368 584 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 FAAP100Q0VG06 881 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 MAD2L1Q13257 205 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-203ENST00000359759 XRCC4Q13426 336 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 B3GNT6Q6ZMB0 384 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 TATDN2Q93075 761 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 HGH1Q9BTY7 390 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 HMG20AQ9NP66 347 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 CCDC182A6NF36 153 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 AKAP5P24588 427 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 ADAM32Q8TC27 787 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 PROX1Q92786 737 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 CGRRF1Q99675 332 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 C1orf50Q9BV19 199 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 BTBD3Q9Y2F9 522 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 TBKBP1A7MCY6 615 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 CRATP43155 626 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 NPTX2P47972 431 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 GLT6D1Q7Z4J2 308 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 LACRTQ9GZZ8 138 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 SEMA4BQ9NPR2 832 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-203ENST00000359759 A0A096LPK6 155 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 ATP4AP20648 1035 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 ABCG1P45844 678 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 C8orf59Q8N0T1 100 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-203ENST00000359759 PSMA8Q8TAA3 256 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 METTL6Q8TCB7 284 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 CPNE1Q99829 537 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 EFR3BQ9Y2G0 817 aa16.34■□□□□ 0.21
COL18A1-203ENST00000359759 PSMG1O95456 288 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 PGAM1P18669 254 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 GPR15P49685 360 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 ACOX1Q15067 660 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF470Q6ECI4 717 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 MZT2BQ6NZ67 158 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 HIPK1Q86Z02 1210 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 TAS1R2Q8TE23 839 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 STK32AQ8WU08 396 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 TBL1YQ9BQ87 522 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 EPB41L4BQ9H329 900 aa16.33■□□□□ 0.21
COL18A1-203ENST00000359759 FAM25EA8MYX2 175 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 ARP10275 920 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 CDK16Q00536 496 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 GIT2Q14161 759 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 GPRC5AQ8NFJ5 357 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 ACTRT2Q8TDY3 377 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MRPS31Q92665 395 aaKnown RBP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 CNPY3Q9BT09 278 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 MOXD2PA6NHM9 499 aa16.33■□□□□ 0.2
COL18A1-203ENST00000359759 DBTP11182 482 aaKnown RBP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-203ENST00000359759 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms