RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 NDC80O14777 642 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 ZNF189O75820 626 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 LRIG2O94898 1065 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 MOCS2O96007 188 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 IGLV3-27P01718 113 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 C8AP07357 584 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 SPATA31D3P0C874 917 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 SERPINB6P35237 376 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 TNNT3P45378 269 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 RPL21P46778 160 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 NRG1Q02297 640 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 PAFAH1B3Q15102 231 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 BEND6Q5SZJ8 279 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 ACBD5Q5T8D3 534 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 DARS2Q6PI48 645 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 SPATA31D4Q6ZUB0 917 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 DDX42Q86XP3 938 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 MIB1Q86YT6 1006 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 TBC1D31Q96DN5 1066 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 TMEM121Q9BTD3 319 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 CCSER2Q9H7U1 834 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 WHRNQ9P202 907 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 NEU2Q9Y3R4 380 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 RAD54BQ9Y620 910 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 NUP205Q92621 2012 aa14.27□□□□□ -0.12
PDLIM5-203ENST00000359265 CLUHO75153 1309 aa14.27□□□□□ -0.12
PDLIM5-203ENST00000359265 FAM72CH0Y354 149 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 DCLK1O15075 740 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 MFSD11O43934 449 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 CLASP2O75122 1294 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 ERCC2P18074 760 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 EPHB2P29323 1055 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 STIP1P31948 543 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 GBE1Q04446 702 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 TRADDQ15628 312 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 TRIP13Q15645 432 aaPredicted RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 PABPC1LQ4VXU2 614 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 PPM1LQ5SGD2 360 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 FAM72AQ5TYM5 149 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 FAM72DQ6L9T8 149 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 FAM72BQ86X60 149 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 CAVIN3Q969G5 261 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 LRRC45Q96CN5 670 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 MRPL38Q96DV4 380 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 BTN2A3PQ96KV6 586 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 MTRF1LQ9UGC7 380 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 SNX10Q9Y5X0 201 aa14.27□□□□□ -0.13
PDLIM5-203ENST00000359265 BCLAF3A2AJT9 711 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 HACD1B0YJ81 288 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 PPP1R12AO14974 1030 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 TBX18O95935 607 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 IFNB1P01574 187 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ECHS1P30084 290 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 HOXA9P31269 272 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 HOXC13P31276 330 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ACTN2P35609 894 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 GGCXP38435 758 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ADCY8P40145 1251 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 VPS41P49754 854 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 COG7P83436 770 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 RBM10P98175 930 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 CAV1Q03135 178 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ZP2Q05996 745 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 PDK1Q15118 436 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 SLC45A4Q5BKX6 768 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 MANEALQ5VSG8 457 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 HDXQ7Z353 690 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 PLD4Q96BZ4 506 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 C1orf74Q96LT6 269 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 OLFM3Q96PB7 478 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 QKIQ96PU8 341 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 FMO2Q99518 471 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 TLE6Q9H808 572 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ZNF334Q9HCZ1 680 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 ETNK2Q9NVF9 386 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 GRHL1Q9NZI5 618 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 DTLQ9NZJ0 730 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 LMCD1Q9NZU5 365 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 HS3ST4Q9Y661 456 aa14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 NYNRINQ9P2P1 1898 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-203ENST00000359265 CACNA1GO43497 2377 aa14.25□□□□□ -0.13
PDLIM5-203ENST00000359265 E9PAM4 449 aa14.25□□□□□ -0.13
PDLIM5-203ENST00000359265 NCAM2O15394 837 aa14.25□□□□□ -0.13
PDLIM5-203ENST00000359265 COCHO43405 550 aa14.25□□□□□ -0.13
PDLIM5-203ENST00000359265 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
PDLIM5-203ENST00000359265 FGF19O95750 216 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms