RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RERGQ96A58 199 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 SLC28A3Q9HAS3 691 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 A1CFQ9NQ94 594 aaKnown RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 M0R3G1 203 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 TM9SF1O15321 606 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CSH1P0DML2 217 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CSH2P0DML3 217 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 FBXO39Q8N4B4 442 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 KCNB2Q92953 911 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 LTFP02788 710 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 ZNF23P17027 643 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 TLX1P31314 330 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 SEMA6BQ9H3T3 888 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 IRF6O14896 467 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 PPP1R37O75864 691 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 ADH1CP00326 375 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RARGP13631 454 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 AMPD1P23109 780 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 NUP62P37198 522 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 GPR15P49685 360 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RARRES1P49788 294 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CCT8P50990 548 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 MAPK7Q13164 816 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 TRIP10Q15642 601 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 TC2NQ8N9U0 490 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 HACD1B0YJ81 288 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 PGAM1P18669 254 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 NTSP30990 170 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CPA2P48052 419 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 IL2P60568 153 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 MGAT5Q09328 741 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 ZNHIT3Q15649 155 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 C7orf61Q8IZ16 206 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 PPP1R13LQ8WUF5 828 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 MTFMTQ96DP5 389 aaKnown RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RSPH9Q9H1X1 276 aaPredicted RBP13.25□□□□□ -0.29
NLRC3-202ENST00000359128 RERGLQ9H628 205 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 CATSPERZQ9NTU4 200 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 NCKIPSDQ9NZQ3 722 aa13.25□□□□□ -0.29
NLRC3-202ENST00000359128 WDR27A2RRH5 827 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 IL1BP01584 269 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 HMGCRP04035 888 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 CRABP2P29373 138 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 CHKAP35790 457 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 DEFA1P59665 94 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 DEFA3P59666 94 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 DYNC1I2Q13409 638 aaKnown RBP13.24□□□□□ -0.29
NLRC3-202ENST00000359128 RAP1GAP2Q684P5 730 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 HTR3CQ8WXA8 447 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 TLE6Q9H808 572 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 PLSCR1O15162 318 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 COPS5Q92905 334 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 EFCAB1Q9HAE3 211 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 VGLL3A8MV65 326 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 SEC22BO75396 215 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 DNTTP04053 509 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 ANXA5P08758 320 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 SOX6P35712 828 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 CDH8P55286 799 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 WSCD1Q658N2 575 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 BRSK2Q8IWQ3 736 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 STK40Q8N2I9 435 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 OR56A4Q8NGH8 313 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 ELMO1Q92556 727 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 PHF21BQ96EK2 531 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 CNBD2Q96M20 576 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 ULBP1Q9BZM6 244 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 NUDT5Q9UKK9 219 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 FGF10O15520 208 aaPredicted RBP13.24□□□□□ -0.29
NLRC3-202ENST00000359128 UBA1P22314 1058 aaKnown RBP13.24□□□□□ -0.29
NLRC3-202ENST00000359128 PSMD5Q16401 504 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 FAM124AQ86V42 546 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 SEC16BQ96JE7 1060 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 QRFPRQ96P65 431 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 HIPK3Q9H422 1215 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 GNPTGQ9UJJ9 305 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 CDH9Q9ULB4 789 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 GLUD1P00367 558 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 PSMC6P62333 389 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 VPS33AQ96AX1 596 aa13.24□□□□□ -0.29
NLRC3-202ENST00000359128 DDX4Q9NQI0 724 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms