RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CERS2Q96G23 380 aa8.82□□□□□ -1
RFX3-202ENST00000358730 ATXN7L3BQ96GX2 97 aa8.82□□□□□ -1
RFX3-202ENST00000358730 TNIP3Q96KP6 325 aa8.82□□□□□ -1
RFX3-202ENST00000358730 NAT9Q9BTE0 207 aa8.82□□□□□ -1
RFX3-202ENST00000358730 DNAI2Q9GZS0 605 aa8.82□□□□□ -1
RFX3-202ENST00000358730 KLHL8Q9P2G9 620 aaPredicted RBP8.82□□□□□ -1
RFX3-202ENST00000358730 DCDC2Q9UHG0 476 aa8.82□□□□□ -1
RFX3-202ENST00000358730 APOBEC2Q9Y235 224 aaKnown RBP8.82□□□□□ -1
RFX3-202ENST00000358730 SMIM28A0A1B0GU29 152 aa8.82□□□□□ -1
RFX3-202ENST00000358730 CLDN5O00501 218 aa8.82□□□□□ -1
RFX3-202ENST00000358730 PROCP04070 461 aa8.82□□□□□ -1
RFX3-202ENST00000358730 GMPRP36959 345 aa8.82□□□□□ -1
RFX3-202ENST00000358730 GP5P40197 560 aa8.82□□□□□ -1
RFX3-202ENST00000358730 PEX19P40855 299 aa8.82□□□□□ -1
RFX3-202ENST00000358730 GARSP41250 739 aaKnown RBP8.82□□□□□ -1
RFX3-202ENST00000358730 TUBP50607 506 aa8.82□□□□□ -1
RFX3-202ENST00000358730 TUBB3Q13509 450 aa8.82□□□□□ -1
RFX3-202ENST00000358730 IRGCQ6NXR0 463 aa8.82□□□□□ -1
RFX3-202ENST00000358730 TMEM154Q6P9G4 183 aa8.82□□□□□ -1
RFX3-202ENST00000358730 PSTKQ8IV42 348 aaKnown RBP8.82□□□□□ -1
RFX3-202ENST00000358730 SLC25A41Q8N5S1 370 aa8.82□□□□□ -1
RFX3-202ENST00000358730 UCMAQ8WVF2 138 aa8.82□□□□□ -1
RFX3-202ENST00000358730 FAM136AQ96C01 138 aa8.82□□□□□ -1
RFX3-202ENST00000358730 AGAP3Q96P47 875 aa8.82□□□□□ -1
RFX3-202ENST00000358730 STN1Q9H668 368 aaKnown RBP8.82□□□□□ -1
RFX3-202ENST00000358730 GDAP2Q9NXN4 497 aa8.82□□□□□ -1
RFX3-202ENST00000358730 COPG2Q9UBF2 871 aa8.82□□□□□ -1
RFX3-202ENST00000358730 STAP1Q9ULZ2 295 aa8.82□□□□□ -1
RFX3-202ENST00000358730 SOX13Q9UN79 622 aa8.82□□□□□ -1
RFX3-202ENST00000358730 EEF2KO00418 725 aaKnown RBP8.81□□□□□ -1
RFX3-202ENST00000358730 HUS1O60921 280 aa8.81□□□□□ -1
RFX3-202ENST00000358730 USP12O75317 370 aa8.81□□□□□ -1
RFX3-202ENST00000358730 C6orf222P0C671 652 aaPredicted RBP8.81□□□□□ -1
RFX3-202ENST00000358730 DARSP14868 501 aaKnown RBP8.81□□□□□ -1
RFX3-202ENST00000358730 NOS2P35228 1153 aa8.81□□□□□ -1
RFX3-202ENST00000358730 PNPLA4P41247 253 aa8.81□□□□□ -1
RFX3-202ENST00000358730 ACTR3P61158 418 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SV2CQ496J9 727 aa8.81□□□□□ -1
RFX3-202ENST00000358730 DUSP28Q4G0W2 176 aa8.81□□□□□ -1
RFX3-202ENST00000358730 RABGAP1LQ5R372 815 aa8.81□□□□□ -1
RFX3-202ENST00000358730 PID1Q7Z2X4 250 aa8.81□□□□□ -1
RFX3-202ENST00000358730 MAVSQ7Z434 540 aa8.81□□□□□ -1
RFX3-202ENST00000358730 CMC1Q7Z7K0 106 aa8.81□□□□□ -1
RFX3-202ENST00000358730 RSPH3Q86UC2 560 aa8.81□□□□□ -1
RFX3-202ENST00000358730 TP53INP2Q8IXH6 220 aa8.81□□□□□ -1
RFX3-202ENST00000358730 KBTBD2Q8IY47 623 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SIX6OS1Q8N1H7 587 aa8.81□□□□□ -1
RFX3-202ENST00000358730 POU5F2Q8N7G0 328 aa8.81□□□□□ -1
RFX3-202ENST00000358730 OR52K1Q8NGK4 314 aa8.81□□□□□ -1
RFX3-202ENST00000358730 ZNF669Q96BR6 464 aaPredicted RBP8.81□□□□□ -1
RFX3-202ENST00000358730 ZNF184Q99676 751 aaPredicted RBP8.81□□□□□ -1
RFX3-202ENST00000358730 YIPF3Q9GZM5 350 aa8.81□□□□□ -1
RFX3-202ENST00000358730 LRRC4Q9HBW1 653 aa8.81□□□□□ -1
RFX3-202ENST00000358730 TMEM216Q9P0N5 145 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SORCS3Q9UPU3 1222 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SF3B1O75533 1304 aaKnown RBP eCLIP8.81□□□□□ -1
RFX3-202ENST00000358730 RRN3P2A6NIE6 340 aa8.81□□□□□ -1
RFX3-202ENST00000358730 XPOTO43592 962 aaKnown RBP8.81□□□□□ -1
RFX3-202ENST00000358730 SIN3BO75182 1162 aa8.81□□□□□ -1
RFX3-202ENST00000358730 BEST1O76090 585 aa8.81□□□□□ -1
RFX3-202ENST00000358730 PRKCGP05129 697 aa8.81□□□□□ -1
RFX3-202ENST00000358730 ANPEPP15144 967 aa8.81□□□□□ -1
RFX3-202ENST00000358730 NPR3P17342 541 aa8.81□□□□□ -1
RFX3-202ENST00000358730 MX2P20592 715 aa8.81□□□□□ -1
RFX3-202ENST00000358730 ACAT1P24752 427 aaKnown RBP8.81□□□□□ -1
RFX3-202ENST00000358730 GRK2P25098 689 aa8.81□□□□□ -1
RFX3-202ENST00000358730 NDUFV1P49821 464 aa8.81□□□□□ -1
RFX3-202ENST00000358730 GTF2A2P52657 109 aa8.81□□□□□ -1
RFX3-202ENST00000358730 AP2B1P63010 937 aa8.81□□□□□ -1
RFX3-202ENST00000358730 DEUP1Q05D60 604 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SOX4Q06945 474 aaPredicted RBP8.81□□□□□ -1
RFX3-202ENST00000358730 ITGA9Q13797 1035 aa8.81□□□□□ -1
RFX3-202ENST00000358730 HIC1Q14526 733 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SPANXN3Q5MJ09 141 aa8.81□□□□□ -1
RFX3-202ENST00000358730 DPP9Q86TI2 863 aa8.81□□□□□ -1
RFX3-202ENST00000358730 OSTM1Q86WC4 334 aa8.81□□□□□ -1
RFX3-202ENST00000358730 NPY6RQ99463 290 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SORT1Q99523 831 aa8.81□□□□□ -1
RFX3-202ENST00000358730 CPNE1Q99829 537 aa8.81□□□□□ -1
RFX3-202ENST00000358730 C1orf21Q9H246 121 aa8.81□□□□□ -1
RFX3-202ENST00000358730 RNF39Q9H2S5 420 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SNX15Q9NRS6 342 aa8.81□□□□□ -1
RFX3-202ENST00000358730 KRT82Q9NSB4 513 aa8.81□□□□□ -1
RFX3-202ENST00000358730 PIGVQ9NUD9 493 aa8.81□□□□□ -1
RFX3-202ENST00000358730 PNPOQ9NVS9 261 aa8.81□□□□□ -1
RFX3-202ENST00000358730 NDE1Q9NXR1 346 aa8.81□□□□□ -1
RFX3-202ENST00000358730 IGSF9Q9P2J2 1179 aa8.81□□□□□ -1
RFX3-202ENST00000358730 SHROOM3Q8TF72 1996 aa8.8□□□□□ -1
RFX3-202ENST00000358730 ARHGAP42A6NI28 874 aa8.8□□□□□ -1
RFX3-202ENST00000358730 KLHL2O95198 593 aa8.8□□□□□ -1
RFX3-202ENST00000358730 F7P08709 466 aaPredicted RBP8.8□□□□□ -1
RFX3-202ENST00000358730 SMIM10L2AP0DMW4 78 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SMIM10L2BP0DMW5 78 aa8.8□□□□□ -1
RFX3-202ENST00000358730 RALBP11234 206 aa8.8□□□□□ -1
RFX3-202ENST00000358730 CYP2C9P11712 490 aa8.8□□□□□ -1
RFX3-202ENST00000358730 CPOXP36551 454 aa8.8□□□□□ -1
RFX3-202ENST00000358730 COPAP53621 1224 aa8.8□□□□□ -1
RFX3-202ENST00000358730 SLC25A3Q00325 362 aa8.8□□□□□ -1
RFX3-202ENST00000358730 DPYSQ14117 519 aa8.8□□□□□ -1
RFX3-202ENST00000358730 PAFAH1B3Q15102 231 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms