RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 GNEQ9Y223 722 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 A0A1W2PPM1 405 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 FOSP01100 380 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 CTNNA2P26232 953 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.888e-6■■■■□ 21.8
SMARCAL1-202ENST00000358207 CDH15P55291 814 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 SPIRE1Q08AE8 756 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 CALCOCO2Q13137 446 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 MTMR1Q13613 665 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 UBE2UQ5VVX9 321 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 PLPP6Q8IY26 295 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 RAD54LQ92698 747 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 DEFB118Q96PH6 123 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 ALPK1Q96QP1 1244 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 COQ7Q99807 217 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 RUSC1Q9BVN2 902 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 NUF2Q9BZD4 464 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 KLQ9UEF7 1012 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 IGSF9BQ9UPX0 1349 aa9.56□□□□□ -0.88
SMARCAL1-202ENST00000358207 JRKO75564 520 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 KLHL2O95198 593 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 MYL2P10916 166 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PRKACAP17612 351 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 MAGEA4P43358 317 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 MARCKSL1P49006 195 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLC25A3Q00325 362 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PRKCEQ02156 737 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 RALGPS1Q5JS13 557 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ZFYVE27Q5T4F4 411 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 AGAP7PQ5VUJ5 663 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PLA2G4FQ68DD2 849 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PLEKHA7Q6IQ23 1121 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ANKRD26P1Q6NSI1 321 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 CYFIP1Q7L576 1253 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 DSG4Q86SJ6 1040 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ELMOD2Q8IZ81 293 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 SYCE1Q8N0S2 351 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 CRYGNQ8WXF5 182 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ZUFSPQ96AP4 578 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 SDCCAG3Q96C92 435 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PGBD4Q96DM1 585 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 TMA16Q96EY4 203 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ZNF668Q96K58 619 aaPredicted RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 C9orf72Q96LT7 481 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 AK8Q96MA6 479 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 SPATC1LQ9H0A9 340 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PORCNQ9H237 461 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 HIPK3Q9H422 1215 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 RIC8BQ9NVN3 520 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ATP11BQ9Y2G3 1177 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 MTO1Q9Y2Z2 717 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 FRMPD4Q14CM0 1322 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 FAM237BA0A1B0GVD1 139 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARHGAP42A6NI28 874 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 GMNNO75496 209 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLC18A1P54219 525 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 NPEPPSP55786 919 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 C10orf76Q5T2E6 689 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PSD4Q8NDX1 1056 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 GRK7Q8WTQ7 553 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRUB1Q8WWH5 349 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 FERMT1Q9BQL6 677 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 TDRD1Q9BXT4 1180 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 Q9H521 79 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 RPF2Q9H7B2 306 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 PLEKHA5Q9HAU0 1116 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ANLNQ9NQW6 1124 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 KCNN3Q9UGI6 736 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ST14Q9Y5Y6 855 aa9.55□□□□□ -0.88
SMARCAL1-202ENST00000358207 ILVBLA1L0T0 632 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 E5RJQ4 531 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SEPT4O43236 478 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 RPL10P27635 214 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PGM5Q15124 567 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 UGCGQ16739 394 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PGS1Q32NB8 556 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 INAVAQ3KP66 663 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 BBS9Q3SYG4 887 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 DNAL1Q4LDG9 190 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PPP6R3Q5H9R7 873 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 UTS2BQ765I0 119 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SETD3Q86TU7 594 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCDC105Q8IYK2 499 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRPV1Q8NER1 839 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCDC124Q96CT7 223 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 MAP6Q96JE9 813 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TOX2Q96NM4 488 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TEX13BQ9BXU2 312 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GANQ9H2C0 597 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms