RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ZC2HC1CQ53FD0 456 aaPredicted RBP9.96□□□□□ -0.81
CHD3-202ENST00000358181 FAM171A1Q5VUB5 890 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 PRR5LQ6MZQ0 368 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 DNAJC14Q6Y2X3 702 aaPredicted RBP9.96□□□□□ -0.81
CHD3-202ENST00000358181 PRSS58Q8IYP2 241 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 CDYL2Q8N8U2 506 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 BRSK1Q8TDC3 778 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 OSBPL2Q9H1P3 480 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 LDAHQ9H6V9 325 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.81
CHD3-202ENST00000358181 RGS20O76081 388 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 SLC7A2P52569 658 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 GTF2A2P52657 109 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 PPP2R2AP63151 447 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 PPP2R2BQ00005 443 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 CBWD6Q4V339 395 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 MRNIPQ6NTE8 343 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 STOX1Q6ZVD7 989 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 SAMD3Q8N6K7 520 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 SLAIN1Q8ND83 568 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 BARHL2Q9NY43 387 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 GMEB2Q9UKD1 530 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CDH7Q9ULB5 785 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CTSOP43234 321 aaPredicted RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 MECP2P51608 486 aaKnown RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 CDKL1Q00532 357 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CHRNB3Q05901 458 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 ZYG11AQ6WRX3 759 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CXorf56Q9H5V9 222 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHD3-202ENST00000358181 NUP50Q9UKX7 468 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 COG5Q9UP83 839 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 SLC33A1O00400 549 aaPredicted RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 E2F3O00716 465 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CD3EAPO15446 510 aaKnown RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 STX11O75558 287 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 IL1BP01584 269 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CXCR2P25025 360 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 TLX1P31314 330 aaPredicted RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 POLD2P49005 469 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 KLK7P49862 253 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 ZBED6P86452 979 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 CDC42EP1Q00587 391 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 NR6A1Q15406 480 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 ATL1Q8WXF7 558 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 ITCHQ96J02 903 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 AGPAT1Q99943 283 aa9.96□□□□□ -0.82
CHD3-202ENST00000358181 RPAP1Q9BWH6 1393 aaPredicted RBP9.96□□□□□ -0.82
CHD3-202ENST00000358181 TMEM120BA0PK00 339 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 EFCAB10A6NFE3 127 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 ZNF185O15231 689 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SEC22BO75396 215 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 OR5F1O95221 314 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SPATA31D3P0C874 917 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GPR15P49685 360 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CYP4F2P78329 520 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CYP4F3Q08477 520 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CSHL1Q14406 222 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SPATA31D4Q6ZUB0 917 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 C3orf62Q6ZUJ4 267 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 FAM129CQ86XR2 697 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 DENND6BQ8NEG7 585 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 OR2L3Q8NG85 312 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PROX1Q92786 737 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SERPINB12Q96P63 405 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GOLPH3Q9H4A6 298 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 C3orf18Q9UK00 162 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 PCDHB11Q9Y5F2 797 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 TCF7P36402 384 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 ITPK1Q13572 414 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ADGRF2Q8IZF7 708 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 C12orf50Q8NA57 414 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 IFT52Q9Y366 437 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 SNX13Q9Y5W8 968 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 FLT1P17948 1338 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CDK12Q9NYV4 1490 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 BTN3A3O00478 584 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ZNF37AP17032 561 aaPredicted RBP9.95□□□□□ -0.82
CHD3-202ENST00000358181 WASP42768 502 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ACADSBP45954 432 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CACNA2D1P54289 1103 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CCNG2Q16589 344 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ZNF621Q6ZSS3 439 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 TMPRSS9Q7Z410 1059 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 OR52L1Q8NGH7 329 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 NRDE2Q9H7Z3 1164 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GEMP55040 296 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CCINQ13939 588 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 CCNYL2Q5T2Q4 361 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 GPAT2Q6NUI2 795 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 DENND1BQ6P3S1 775 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 ACOT1Q86TX2 421 aa9.95□□□□□ -0.82
CHD3-202ENST00000358181 MB21D2Q8IYB1 491 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms