RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 GSC2O15499 205 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 RIPK2O43353 540 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 FAM189A1O60320 539 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TRMUO75648 421 aaKnown RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 KRT36O76013 467 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 ATP5BP06576 529 aaKnown RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 MSL3P1P0C860 447 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SPATA31D3P0C874 917 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TAC1P20366 129 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 CCDC14Q49A88 953 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 MIIPQ5JXC2 388 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 FAAH2Q6GMR7 532 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SPATA31D4Q6ZUB0 917 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 FRMD5Q7Z6J6 570 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SLFN11Q7Z7L1 901 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 DDHD1Q8NEL9 900 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 STARD8Q92502 1023 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 BAP1Q92560 729 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 NSL1Q96IY1 281 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 CCDC77Q9BR77 488 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 CAAP1Q9H8G2 361 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SENP1Q9P0U3 644 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 ITM2BQ9Y287 266 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 LRRC53A6NM62 1247 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 VILLO15195 856 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 GYG2O15488 501 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TLL1O43897 1013 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 PLEKP08567 350 aaPredicted RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 KRT13P13646 458 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 ETS2P15036 469 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 ANPEPP15144 967 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 MYOGP15173 224 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 BFSP1Q12934 665 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SEPT7Q16181 437 aaKnown RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 KYNUQ16719 465 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 UBXN11Q5T124 520 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 VSTM1Q6UX27 236 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TREML1Q86YW5 311 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 TMEM192Q8IY95 271 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 CCDC127Q96BQ5 260 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 ADAM2Q99965 735 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 CADM1Q9BY67 442 aaKnown RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 GIN1Q9NXP7 522 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 RBAKQ9NYW8 714 aaPredicted RBP11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 HES2Q9Y543 173 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 PCDHB11Q9Y5F2 797 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
HIST4H4-201ENST00000358064 EYSQ5T1H1 3165 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 MICAL3Q7RTP6 2002 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 MTRF1O75570 445 aaKnown RBP11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 GJB5O95377 273 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CLPTM1O96005 669 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 NFKBIAP25963 317 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CHRNA3P32297 505 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 IRS1P35568 1242 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 VAMP7P51809 220 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 COG7P83436 770 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 GFPT1Q06210 699 aaPredicted RBP11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CYP24A1Q07973 514 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 ANKRD20A4Q4UJ75 823 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 HGSNATQ68CP4 663 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 PDSS2Q86YH6 399 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 OR6Y1Q8NGX8 325 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CEP70Q8NHQ1 597 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 LINC01599Q8WXQ3 324 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 MFSD3Q96ES6 412 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 SHDQ96IW2 340 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 TTC25Q96NG3 672 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 APOL6Q9BWW8 343 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 STK33Q9BYT3 514 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 GBA3Q9H227 469 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 FAM105AQ9NUU6 356 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 CPSF3Q9UKF6 684 aaKnown RBP11.1□□□□□ -0.63
HIST4H4-201ENST00000358064 SOBPA7XYQ1 873 aa11.09□□□□□ -0.63
HIST4H4-201ENST00000358064 GIPC1O14908 333 aa11.09□□□□□ -0.63
HIST4H4-201ENST00000358064 IDH3BO43837 385 aa11.09□□□□□ -0.63
HIST4H4-201ENST00000358064 CNOT3O75175 753 aaKnown RBP11.09□□□□□ -0.63
HIST4H4-201ENST00000358064 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
HIST4H4-201ENST00000358064 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms