RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TRAPPC12Q8WVT3 735 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 ZFP42Q96MM3 310 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 SYBUQ9NX95 663 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 DNPEPQ9ULA0 475 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 TNFSF13BQ9Y275 285 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 ATRNO75882 1429 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 CYP2A7P20853 494 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 CCNG1P51959 295 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 ADIGQ0VDE8 80 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 NR6A1Q15406 480 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 GALNTL6Q49A17 601 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 C12orf56Q8IXR9 622 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 CKAP2Q8WWK9 683 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 SHC3Q92529 594 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 LENG9Q96B70 501 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 COPS7BQ9H9Q2 264 aaPredicted RBP12□□□□□ -0.49
COL9A1-202ENST00000357250 CYP4F12Q9HCS2 524 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 NDUFAF1Q9Y375 327 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 IPPQ9Y573 584 aa12□□□□□ -0.49
COL9A1-202ENST00000357250 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 IMPDH2P12268 514 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CBWD6Q4V339 395 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CBWD3Q5JTY5 395 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CBWD5Q5RIA9 395 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 IYDQ6PHW0 289 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 KCNT2Q6UVM3 1135 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 SETD9Q8NE22 299 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 DNAJC19Q96DA6 116 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 PANX3Q96QZ0 392 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 KCTD14Q9BQ13 255 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 PARVBQ9HBI1 364 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 COPG2Q9UBF2 871 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 hCG_2014768A0A024R1R8 64 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 TBC1D12O60347 775 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 MSH3P20585 1137 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 AMPD2Q01433 879 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 EPS8Q12929 822 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 NCF4Q15080 339 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 FAM45BPQ6NSW5 357 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 PHF13Q86YI8 300 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 SVOPQ8N4V2 548 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 ZFYVE19Q96K21 471 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 DPY30Q9C005 99 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 UXTQ9UBK9 157 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 TNPO3Q9Y5L0 923 aaKnown RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 LACTBL1A8MY62 500 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 GPC1P35052 558 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 TBCELQ5QJ74 424 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 FAM84AQ96KN4 292 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 P2RX7Q99572 595 aaKnown RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 APOL2Q9BQE5 337 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 UGT2B28Q9BY64 529 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 RAD21L1Q9H4I0 556 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CAB39Q9Y376 341 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 UBIAD1Q9Y5Z9 338 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF839A8K0R7 811 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 TNFAIP8O95379 198 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 LTFP02788 710 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 PPP2R1BP30154 601 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 EPHX2P34913 555 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CHI3L1P36222 383 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-202ENST00000357250 FUT11Q495W5 492 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 DHFR2Q86XF0 187 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 TRIM48Q8IWZ4 208 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 DEFB106AQ8N104 65 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 WNT8BQ93098 351 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 REPS1Q96D71 796 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 RGS18Q9NS28 235 aa11.99□□□□□ -0.49
COL9A1-202ENST00000357250 A0A0A0MRY4 1105 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 MANSC4A6NHS7 340 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 KATNA1O75449 491 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 LYPLA2O95372 231 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 FAM153BP0C7A2 387 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 AKR1A1P14550 325 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 SSTR1P30872 391 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TUFMP49411 452 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 CCT8P50990 548 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF143P52747 638 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 BTKQ06187 659 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 DDX39BQ13838 428 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 C1DQ13901 141 aaKnown RBP11.98□□□□□ -0.49
COL9A1-202ENST00000357250 FAM153CQ494X1 144 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 HYIQ5T013 277 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 IRGCQ6NXR0 463 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 ARCQ7LC44 396 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 RIOX2Q8IUF8 465 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 SPATA13Q96N96 652 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 TBL1YQ9BQ87 522 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 KRT84Q9NSB2 600 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 RNF19AQ9NV58 838 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 YDJCA8MPS7 323 aa11.98□□□□□ -0.49
COL9A1-202ENST00000357250 RBAK-RBAKDNI3L0D1 243 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms