RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 HTR7P34969 479 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 NR2C2P49116 596 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 IRAK1P51617 712 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 PTK6Q13882 451 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 PPP1R7Q15435 360 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 RAP1GAP2Q684P5 730 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 RWDD4Q6NW29 188 aaKnown RBP18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 GSPT2Q8IYD1 628 aaKnown RBP18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 MYEOVQ96EZ4 313 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 OLFM3Q96PB7 478 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 GCNAQ96QF7 691 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 SLC46A2Q9BY10 475 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 KLC2Q9H0B6 622 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 NFU1Q9UMS0 254 aa18.7■□□□□ 0.58
SMARCD3-202ENST00000356800 ACSL4O60488 711 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 GREM1O60565 184 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 PAPLNO95428 1278 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 HARS2P49590 506 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 GDF10P55107 478 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM133BQ5BKY9 247 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 PRSS36Q5K4E3 855 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 FBXL22Q6P050 247 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 PDZD4Q76G19 769 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 GRASPQ7Z6J2 395 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 DDX42Q86XP3 938 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 DENND1CQ8IV53 801 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 CAVIN3Q969G5 261 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 IGSF8Q969P0 613 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM129AQ9BZQ8 928 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 TRIM31Q9BZY9 425 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 MPP6Q9NZW5 540 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 CPQQ9Y646 472 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 IGLV3-10A0A075B6K4 115 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 FGF19O95750 216 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 SLC6A4P31645 630 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 SLC7A9P82251 487 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 TEAD2Q15562 447 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 TRIP13Q15645 432 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 CCHCR1Q8TD31 782 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 AZIN2Q96A70 460 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 CDCA3Q99618 268 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 DPH5Q9H2P9 285 aa18.69■□□□□ 0.58
SMARCD3-202ENST00000356800 SHROOM3Q8TF72 1996 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 H7C0C1 242 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 FGF10O15520 208 aaPredicted RBP18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 GLP2RO95838 553 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 CKMP06732 381 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 ZSCAN5DPP0CG00 497 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 ETS1P14921 441 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 TACR2P21452 398 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 ATP5OP48047 213 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 MTA1Q13330 715 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 XRCC4Q13426 336 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 DARS2Q6PI48 645 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 ELMSAN1Q6PJG2 1045 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 POTEHQ6S545 545 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 GSTA5Q7RTV2 222 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 HDXQ7Z353 690 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 NLRP14Q86W24 1093 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 CHSY1Q86X52 802 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 CCDC89Q8N998 374 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 FUT8Q9BYC5 575 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 IGFLR1Q9H665 355 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 USP29Q9HBJ7 922 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 NDFIP2Q9NV92 336 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 GRHL1Q9NZI5 618 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 PPARGC1AQ9UBK2 798 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 AGO1Q9UL18 857 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 SNX24Q9Y343 169 aa18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 NYNRINQ9P2P1 1898 aaKnown RBP18.68■□□□□ 0.58
SMARCD3-202ENST00000356800 TRAV19A0A0A6YYK7 116 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 DRGXA6NNA5 263 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 SGK1O00141 431 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 CNTN5O94779 1100 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 KRT14P02533 472 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 PFKLP17858 780 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 IVDP26440 423 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 RPL21P46778 160 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 SLC11A2P49281 568 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 NRLP54845 237 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 HYAL1Q12794 435 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 HLTFQ14527 1009 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 ALFQ53S48 1182 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 TCEAL5Q5H9L2 206 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM182AQ5T1J6 154 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 GPR158Q5T848 1215 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 ACBD5Q5T8D3 534 aaPredicted RBP18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 RFWD3Q6PCD5 774 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 TMC5Q6UXY8 1006 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 FAM71DQ8N9W8 422 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 LEMD2Q8NC56 503 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 SMG7Q92540 1137 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 QKIQ96PU8 341 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 CATSPERBQ9H7T0 1116 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 ZDHHC18Q9NUE0 388 aa18.67■□□□□ 0.58
SMARCD3-202ENST00000356800 BCLAF3A2AJT9 711 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-202ENST00000356800 WASH4PA8MWX3 477 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms