RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RAP1GAP2Q684P5 730 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 DGCR6LQ9BY27 220 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 TFR2Q9UP52 801 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 XYLBO75191 536 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-201ENST00000356083 ANKFN1Q8N957 763 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 ARHGAP28Q9P2N2 729 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 A0A0B4J269 797 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 H7C1W4 665 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 TNFRSF21O75509 655 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 KBTBD12Q3ZCT8 623 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 EFCAB3Q8N7B9 438 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF563Q8TA94 476 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 NUDT5Q9UKK9 219 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-201ENST00000356083 KDM5CP41229 1560 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 PSMD9O00233 223 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 AMHP03971 560 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 ERCC2P18074 760 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 PTGISQ16647 500 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 TBX20Q9UMR3 447 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 CLEC4AQ9UMR7 237 aa17.58■□□□□ 0.4
COL27A1-201ENST00000356083 RAD51CO43502 376 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 NFIXQ14938 502 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 NAT16Q8N8M0 369 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RAD51AP1Q96B01 352 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 IRX2Q9BZI1 471 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RASSF1Q9NS23 344 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 SNX12Q9UMY4 172 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 COG5Q9UP83 839 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 INVSQ9Y283 1065 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 TLX1P31314 330 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 DGCR6Q14129 220 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF280DQ6N043 979 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 IKBIPQ70UQ0 350 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 APLFQ8IW19 511 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MCEMP1Q8IX19 187 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MAGEC3Q8TD91 643 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 CORO1BQ9BR76 489 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 KLRC1P26715 233 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RNASE12Q5GAN4 147 aaKnown RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MXRA8Q9BRK3 442 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 DSEQ9UL01 958 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RP1P56715 2156 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RAMP2O60895 175 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 THRAP10827 490 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 TKTL1P51854 596 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 TBX4P57082 545 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 POLR2LP62875 67 aaKnown RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RAET1GQ6H3X3 334 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 OR2L5Q8NG80 312 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 FERD3LQ96RJ6 166 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 APBA2Q99767 749 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 KCNH7Q9NS40 1196 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 PSME2Q9UL46 239 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 PLOD3O60568 738 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 BCAT1P54687 386 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MARC1Q5VT66 337 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 PLEKHH3Q7Z736 793 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 SUGP1Q8IWZ8 645 aaKnown RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 FAM9CQ8IZT9 166 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 LNX2Q8N448 690 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 OR52L1Q8NGH7 329 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 RNF145Q96MT1 663 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 PCDH12Q9NPG4 1184 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 FLT1P17948 1338 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 TCOF1Q13428 1488 aaKnown RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 CD3EAPO15446 510 aaKnown RBP17.57■□□□□ 0.4
COL27A1-201ENST00000356083 BCL10O95999 233 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 ATP13A4Q4VNC1 1196 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 LIN54Q6MZP7 749 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 COLGALT1Q8NBJ5 622 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 ATG4CQ96DT6 458 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 SETD4Q9NVD3 440 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 OGDHLQ9ULD0 1010 aa17.57■□□□□ 0.4
COL27A1-201ENST00000356083 CES2O00748 559 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 TUBP50607 506 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 KIAA0391O15091 583 aaKnown RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ATP5BP06576 529 aaKnown RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 EPHX2P34913 555 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 CUL2Q13617 745 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 SPANXN2Q5MJ10 180 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 PMEPA1Q969W9 287 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 MID1IP1Q9NPA3 183 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 SMAPO00193 183 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms