RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 HSPA13P48723 471 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 TRPC5OSA6NMA1 111 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 H0YGN5 161 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 TMCC1O94876 653 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 ASS1P00966 412 aaKnown RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 DDIT4Q9NX09 232 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SNCAIPQ9Y6H5 919 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SLC12A8A0AV02 714 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 C2orf71A6NGG8 1288 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 PROCP04070 461 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SLC25A3Q00325 362 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 ISLR2Q6UXK2 745 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 BHMTQ93088 406 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 TSPAN17Q96FV3 270 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CATSPER2Q96P56 530 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 MECRQ9BV79 373 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 UNKQ9C0B0 810 aaKnown RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CIPCQ9C0C6 399 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 MMADHCQ9H3L0 296 aaPredicted RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 EFCAB1Q9HAE3 211 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 RHBDL2Q9NX52 303 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 BARX2Q9UMQ3 279 aaPredicted RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SLC30A1Q9Y6M5 507 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SYCE1LA8MT33 242 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 E5RJQ4 531 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CHADO15335 359 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 AVILO75366 819 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 ESRRBO95718 433 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 CLPTM1O96005 669 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 AMPD1P23109 780 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 BST1Q10588 318 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 EFEMP1Q12805 493 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 UBAP2LQ14157 1087 aaKnown RBP12.61□□□□□ -0.39
COLCA1-201ENST00000355430 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
COLCA1-201ENST00000355430 ZNF197O14709 1029 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TRUB2O95900 331 aaKnown RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ASGR1P07306 291 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 HADHAP40939 763 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 USP41Q3LFD5 358 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 PSRC1Q6PGN9 363 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 NET1Q7Z628 596 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 CYP4X1Q8N118 509 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 APPL1Q9UKG1 709 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 LAMB4A4D0S4 1761 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 COL1A2P08123 1366 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TPP1O14773 563 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TIMM44O43615 452 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 HDAC4P56524 1084 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 RIPOR1Q6ZS17 1223 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TRIM48Q8IWZ4 208 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 PCYOX1LQ8NBM8 494 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 BSNDQ8WZ55 320 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ADNPQ9H2P0 1102 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 TCF7L2Q9NQB0 619 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 NMRK1Q9NWW6 199 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 LGALS13Q9UHV8 139 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 CCDC157Q569K6 752 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ANKS3Q6ZW76 656 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 MON1BQ7L1V2 547 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 OOSP2Q86WS3 158 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 GAD1Q99259 594 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 MTSS1O43312 755 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 DCXO43602 365 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 MTA2O94776 668 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 PGAM1P18669 254 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 EGFL8Q99944 293 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 ZMYND8Q9ULU4 1186 aaPredicted RBP12.6□□□□□ -0.39
COLCA1-201ENST00000355430 SNX13Q9Y5W8 968 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 V9GYQ6 96 aa12.6□□□□□ -0.39
COLCA1-201ENST00000355430 MMP3P08254 477 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 PSMC3P17980 439 aa12.59□□□□□ -0.39
COLCA1-201ENST00000355430 MAP4P27816 1152 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms