RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ATP11AP98196 1134 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 LMAN2Q12907 356 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 ARID5BQ14865 1188 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 C15orf59Q2T9L4 293 aaPredicted RBP22.83■■□□□ 1.25
SNX3-202ENST00000349379 RAB6CQ53S08 254 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 DNAJC24Q6P3W2 148 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 SARM1Q6SZW1 724 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 CHST9Q7L1S5 443 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 C14orf80Q86SX3 495 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 CHPFQ8IZ52 775 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 IGSF8Q969P0 613 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 RAB6CQ9H0N0 254 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 CACNA2D2Q9NY47 1150 aa22.83■■□□□ 1.25
SNX3-202ENST00000349379 RALGAPA1Q6GYQ0 2036 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 A0A1B0GVM2 712 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 TCAF2A6NFQ2 919 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 TMCO5BA8MYB1 307 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 LMNAP02545 664 aaKnown RBP22.82■■□□□ 1.24
SNX3-202ENST00000349379 SERPING1P05155 500 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 GPD1P21695 349 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 IL12RB1P42701 662 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 TRIM14Q14142 442 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 E2F5Q15329 346 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 FSCBQ5H9T9 825 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 RABGAP1LQ5R372 815 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 ACBD5Q5T8D3 534 aaPredicted RBP22.82■■□□□ 1.24
SNX3-202ENST00000349379 SH3PXD2AQ5TCZ1 1133 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 PLEKHA7Q6IQ23 1121 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 FAM131BQ86XD5 332 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 CARNMT1Q8N4J0 409 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 MDGA1Q8NFP4 955 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 C1orf74Q96LT6 269 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 HAPLN3Q96S86 360 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 ISCUQ9H1K1 167 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 POLMQ9NP87 494 aaPredicted RBP22.82■■□□□ 1.24
SNX3-202ENST00000349379 TMPRSS4Q9NRS4 437 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 INTS6Q9UL03 887 aaKnown RBP22.82■■□□□ 1.24
SNX3-202ENST00000349379 VANGL2Q9ULK5 521 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 STON1Q9Y6Q2 735 aa22.82■■□□□ 1.24
SNX3-202ENST00000349379 THADAQ6YHU6 1953 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 ABCA7Q8IZY2 2146 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 AP5Z1O43299 807 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 GFRA3O60609 400 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 RTN2O75298 545 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 FTLP02792 175 aaPredicted RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 PLEKP08567 350 aaPredicted RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 GGCXP38435 758 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 WASP42768 502 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 IRAK1P51617 712 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 ZNF143P52747 638 aaPredicted RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 HDAC4P56524 1084 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 RPL7AP62424 266 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 SRSF5Q13243 272 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 CDH18Q13634 790 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 ZNF234Q14588 700 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 CDO1Q16878 200 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 FUT11Q495W5 492 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 TDRD12Q587J7 1177 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 MBLAC2Q68D91 279 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 ANO7Q6IWH7 933 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 ALYREFQ86V81 257 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 DNAAF5Q86Y56 855 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 CCAR2Q8N163 923 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 GAB3Q8WWW8 586 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 SORCS1Q8WY21 1168 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 TTC17Q96AE7 1141 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 MCEEQ96PE7 176 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 CIPCQ9C0C6 399 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 RIF1Q5UIP0 2472 aaKnown RBP22.81■■□□□ 1.24
SNX3-202ENST00000349379 GPR179Q6PRD1 2367 aa22.81■■□□□ 1.24
SNX3-202ENST00000349379 IGLV3-10A0A075B6K4 115 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 WASH3PC4AMC7 463 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 ALDH1A2O94788 518 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 MAMLD1Q13495 774 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 PTPRNQ16849 979 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 SDE2Q6IQ49 451 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 CXorf57Q6NSI4 855 aaKnown RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 KIAA1211LQ6NV74 962 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 CIR1Q86X95 450 aaPredicted RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 RPRD1AQ96P16 312 aaPredicted RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 SIK2Q9H0K1 926 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 KIAA1522Q9P206 1035 aaPredicted RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 ARHGAP20Q9P2F6 1191 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 SMG5Q9UPR3 1016 aaKnown RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 SNX10Q9Y5X0 201 aa22.8■■□□□ 1.24
SNX3-202ENST00000349379 TNRC6BQ9UPQ9 1833 aaKnown RBP22.8■■□□□ 1.24
SNX3-202ENST00000349379 NUP205Q92621 2012 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 TCRBV21S2A2A0A5A6 115 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 DRGXA6NNA5 263 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 H0Y626 953 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 CCP110O43303 1012 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 OGDHQ02218 1023 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 CCDC117Q8IWD4 279 aaPredicted RBP22.79■■□□□ 1.24
SNX3-202ENST00000349379 DRC7Q8IY82 874 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 FAM172AQ8WUF8 416 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 NTAN1Q96AB6 310 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 DNAJC7Q99615 494 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 TMEM245Q9H330 911 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 PARVAQ9NVD7 372 aa22.79■■□□□ 1.24
SNX3-202ENST00000349379 ADAMTS1Q9UHI8 967 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms