RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 STON2Q8WXE9 905 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 SLC13A1Q9BZW2 595 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-202ENST00000347617 MARCOQ9UEW3 520 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-202ENST00000347617 DCDC2Q9UHG0 476 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 DOCK3Q8IZD9 2030 aa16.3■□□□□ 0.2
HMGA1-202ENST00000347617 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 HAS3O00219 553 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 ADCY6O43306 1168 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 MED7O43513 233 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 B4GALT4O60513 344 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 KPNA6O60684 536 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 TOMM70O94826 608 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 OR6B1O95007 311 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 IL18RAPO95256 599 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 MCF2P10911 925 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 IGBP1P78318 339 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 TLR1Q15399 786 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 LRRC36Q1X8D7 754 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 CES4AQ5XG92 561 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-202ENST00000347617 ACSF2Q96CM8 615 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-202ENST00000347617 EBF4Q9BQW3 602 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 SDCBP2Q9H190 292 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 STK39Q9UEW8 545 aa16.29■□□□□ 0.2
HMGA1-202ENST00000347617 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 PIAS1O75925 651 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ENDOD1O94919 500 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 PGM3O95394 542 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 CAPNS1P04632 268 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 CDK4P11802 303 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 TPP2P29144 1249 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 USP4Q13107 963 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 AMHR2Q16671 573 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 DUOXA2Q1HG44 320 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 TLK2Q86UE8 772 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 BIRC8Q96P09 236 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 AP5M1Q9H0R1 490 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 SAE1Q9UBE0 346 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 AKT3Q9Y243 479 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 EVPLQ92817 2033 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 A0A087WZ62 844 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 CCDC160A6NGH7 325 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 COX4I1P13073 169 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 TPSB2P20231 275 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 CYP2B6P20813 491 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 TGM2P21980 687 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 IDH3AP50213 366 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 HK2P52789 917 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 FCGRTP55899 365 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 NKX3-2P78367 333 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 TPSAB1Q15661 275 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 RALGPS1Q5JS13 557 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 FAXCQ5TGI0 409 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ERI1Q8IV48 349 aaKnown RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 GCNAQ96QF7 691 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 FDXACB1Q9BRP7 624 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 MINDY3Q9H8M7 445 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 RAB6BQ9NRW1 208 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ASNSD1Q9NWL6 643 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
HMGA1-202ENST00000347617 AK5Q9Y6K8 562 aa16.28■□□□□ 0.2
HMGA1-202ENST00000347617 BCLAF3A2AJT9 711 aaKnown RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 CRTAMO95727 393 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 FGF3P11487 239 aaPredicted RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 ADSLP30566 484 aaPredicted RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 HARS2P49590 506 aaKnown RBP16.27■□□□□ 0.2
HMGA1-202ENST00000347617 WNT7BP56706 349 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 ADAM17P78536 824 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 ZBTB41Q5SVQ8 909 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 DENND5BQ6ZUT9 1274 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 TICAM1Q8IUC6 712 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 MAP7D3Q8IWC1 876 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 NR2E3Q9Y5X4 410 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 AP4B1Q9Y6B7 739 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 CDY2AQ9Y6F7 541 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 CDY1Q9Y6F8 540 aa16.27■□□□□ 0.2
HMGA1-202ENST00000347617 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 KAT6AQ92794 2004 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms