RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FRMD8P1Q9BZ68 369 aaPredicted RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 MAF1Q9H063 256 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PPM1HQ9ULR3 514 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SUFUQ9UMX1 484 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PCDHGB4Q9UN71 923 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PIN4Q9Y237 131 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 HBS1LQ9Y450 684 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 IPPQ9Y573 584 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PCDHGB5Q9Y5G0 923 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 A0A088AWK7 358 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 B2RBV5 119 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ZBTB24O43167 697 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ZBTB14O43829 449 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 DARSP14868 501 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 GABRB3P28472 473 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 CRHR1P34998 444 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 PTPN9P43378 593 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 SULT1E1P49888 294 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 THOC5Q13769 683 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 DPYSQ14117 519 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TFDP2Q14188 446 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 RCN2Q14257 317 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 CRYMQ14894 314 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 SNX17Q15036 470 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 NUDCD3Q8IVD9 361 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 MICAL1Q8TDZ2 1067 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 NAF1Q96HR8 494 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 NPY6RQ99463 290 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 RTP3Q9BQQ7 232 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 CHRAC1Q9NRG0 131 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TMLHEQ9NVH6 421 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 SLC7A8Q9UHI5 535 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF180Q9UJW8 692 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 MTO1Q9Y2Z2 717 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 SPEGQ15772 3267 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ZCWPW2A0A1B0GU75 182 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 EME2A4GXA9 379 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 M0QYT0 321 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 DCLK1O15075 740 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TGDSO95455 350 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 USP17L7P0C7H9 530 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 EPHX2P34913 555 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 CLCNKBP51801 687 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 BST2Q10589 180 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 CASC4Q6P4E1 433 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ISLR2Q6UXK2 745 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 RPS27LQ71UM5 84 aaKnown RBP6.21□□□□□ -1.42
CLCN3-201ENST00000347613 OTOP3Q7RTS5 596 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 MCUQ8NE86 351 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 GIMAP7Q8NHV1 300 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 FAM149B1Q96BN6 582 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF333Q96JL9 665 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TSPAN18Q96SJ8 248 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TINF2Q9BSI4 451 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 NEU3Q9UQ49 428 aa6.21□□□□□ -1.42
CLCN3-201ENST00000347613 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 A6NHS1 94 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ASB14A6NK59 587 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 HHLA1C9JL84 531 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 KLF11O14901 512 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 GYG2O15488 501 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 WFS1O76024 890 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ITGB1P05556 798 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 MSX2P35548 267 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 MATKP42679 507 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TAF11Q15544 211 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 XKR4Q5GH76 650 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 NOMO2Q5JPE7 1267 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 STEAP4Q687X5 459 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 VPS52Q8N1B4 723 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CNTD1Q8N815 330 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 OR6Y1Q8NGX8 325 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SPATA22Q8NHS9 363 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 RNF139Q8WU17 664 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TFB1MQ8WVM0 346 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CELF6Q96J87 481 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 MCMBPQ9BTE3 642 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 KLC2Q9H0B6 622 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 SAR1AQ9NR31 198 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PPARGC1AQ9UBK2 798 aaKnown RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CPA4Q9UI42 421 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 NUDT5Q9UKK9 219 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 DNAJC16Q9Y2G8 782 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 NLRC5Q86WI3 1866 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 A0A0A0MRY4 1105 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 MBLAC1A4D2B0 266 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-201ENST00000347613 G3V2L1 256 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CAPN9O14815 690 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 AURKAO14965 403 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 B4GALT3O60512 393 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PLIN3O60664 434 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 GJB3O75712 270 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CHRNGP07510 517 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 ITGA2BP08514 1039 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CYP2C9P11712 490 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 TPSB2P20231 275 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 PTPN3P26045 913 aa6.2□□□□□ -1.42
CLCN3-201ENST00000347613 CCNHP51946 323 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms