RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SYCP2LQ5T4T6 812 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 NCBP2-AS2Q69YL0 99 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 ZNF438Q7Z4V0 828 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 PPM1EQ8WY54 764 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 SCLYQ96I15 445 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 FAM193BQ96PV7 902 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 CAPS2Q9BXY5 557 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 RNF208Q9H0X6 261 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 WDR6Q9NNW5 1121 aaKnown RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 DMAP1Q9NPF5 467 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 SHOC2Q9UQ13 582 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 PCDHB7Q9Y5E2 793 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 FNDC1Q4ZHG4 1894 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 RASGRF2O14827 1237 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SHOX2O60902 331 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 TADA2AO75478 443 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 TMEM63AO94886 807 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CPP00450 1065 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CCL5P13501 91 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PAX3P23760 479 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 MSX1P28360 303 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CCL23P55773 120 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 GNGT1P63211 74 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 IRX1P78414 480 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 MTM1Q13496 603 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SLC39A12Q504Y0 691 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FNBP1LQ5T0N5 605 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ALG1LQ6GMV1 187 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SPATA2LQ8IUW3 424 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PPIL6Q8IXY8 311 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 NAT8LQ8N9F0 302 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 STKLD1Q8NE28 680 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CASD1Q96PB1 797 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 TMEM109Q9BVC6 243 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FOXP3Q9BZS1 431 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 TANC1Q9C0D5 1861 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ARHGEF37A1IGU5 675 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FAM72CH0Y354 149 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 H0YHG0 523 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 TMEM189-UBE2V1I3L0A0 370 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 RGS16O15492 202 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CREB3O43889 395 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 STIP1P31948 543 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 GRIK1P39086 918 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ARL4AP40617 200 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PGFP49763 221 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ARSDP51689 593 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 BASP1P80723 227 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SARNPP82979 210 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PDIA2Q13087 525 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 MTA1Q13330 715 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 AUHQ13825 339 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 MAPRE1Q15691 268 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FAM72AQ5TYM5 149 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FAM72DQ6L9T8 149 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PCGF5Q86SE9 256 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 FAM72BQ86X60 149 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CCDC13Q8IYE1 715 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ZBED8Q8IZ13 594 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ABI1Q8IZP0 508 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 RNF139Q8WU17 664 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SEPT8Q92599 483 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 PGM2Q96G03 612 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ZCWPW1Q9H0M4 648 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 DDIT4Q9NX09 232 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 ABI2Q9NYB9 513 aaPredicted RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 DTLQ9NZJ0 730 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 CTNNAL1Q9UBT7 734 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
ATG4A-202ENST00000345734 SNX10Q9Y5X0 201 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 NR2E3Q9Y5X4 410 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 KCNMB2Q9Y691 235 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 MICAL3Q7RTP6 2002 aa9.53□□□□□ -0.88
ATG4A-202ENST00000345734 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-202ENST00000345734 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 BCLAF3A2AJT9 711 aaKnown RBP9.52□□□□□ -0.89
ATG4A-202ENST00000345734 MFSD11O43934 449 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 OAZ2O95190 189 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 IVLP07476 585 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-202ENST00000345734 ADRA1BP35368 520 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 PBX3P40426 434 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 IRAK1P51617 712 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 PPP2R2AP63151 447 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 HIF1AQ16665 826 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 ZSCAN26Q16670 478 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 CCDC38Q502W7 563 aa9.52□□□□□ -0.89
ATG4A-202ENST00000345734 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms