RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 KHDC1Q4VXA5 237 aaKnown RBP21.99■■□□□ 1.11
CCDC38-201ENST00000344280 FASTKD1Q53R41 847 aaKnown RBP21.99■■□□□ 1.11
CCDC38-201ENST00000344280 WASHC2DQ5SRD0 308 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 N4BP2L1Q5TBK1 243 aaPredicted RBP21.99■■□□□ 1.11
CCDC38-201ENST00000344280 ATG14Q6ZNE5 492 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 OR52K1Q8NGK4 314 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 LPPQ93052 612 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 PCED1BQ96HM7 432 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 FCRL3Q96P31 734 aaPredicted RBP21.99■■□□□ 1.11
CCDC38-201ENST00000344280 LBHD1Q9BQE6 289 aaPredicted RBP21.99■■□□□ 1.11
CCDC38-201ENST00000344280 EBF4Q9BQW3 602 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 SNX10Q9Y5X0 201 aa21.99■■□□□ 1.11
CCDC38-201ENST00000344280 CAPN9O14815 690 aa21.98■■□□□ 1.11
CCDC38-201ENST00000344280 ESRRAP11474 423 aaPredicted RBP21.98■■□□□ 1.11
CCDC38-201ENST00000344280 KCNA4P22459 653 aa21.98■■□□□ 1.11
CCDC38-201ENST00000344280 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC38-201ENST00000344280 GAD1Q99259 594 aa21.98■■□□□ 1.11
CCDC38-201ENST00000344280 MIOSQ9NXC5 875 aa21.98■■□□□ 1.11
CCDC38-201ENST00000344280 NUP205Q92621 2012 aa21.98■■□□□ 1.11
CCDC38-201ENST00000344280 CAPN14A8MX76 684 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 PPP1R12AO14974 1030 aaPredicted RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 AP1G2O75843 785 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 PRKCGP05129 697 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 ITGA2BP08514 1039 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 PTPN3P26045 913 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CLCNKBP51801 687 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 DAOAP59103 153 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 IFRD2Q12894 506 aaPredicted RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 RSRC1Q96IZ7 334 aaKnown RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 ZNF778Q96MU6 729 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 PAAF1Q9BRP4 392 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 PPARGC1AQ9UBK2 798 aaKnown RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 SF3B1O75533 1304 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 BIRC5O15392 142 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CYP2B6P20813 491 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CNTFP26441 200 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CPT1AP50416 773 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CCNG1P51959 295 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 SEMA3BQ13214 749 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 STX3Q13277 289 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 MBLAC2Q68D91 279 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 FAM35AQ86V20 835 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CRLF3Q8IUI8 442 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CDKL2Q92772 493 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 TSPAN18Q96SJ8 248 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 MYCBPQ99417 103 aaPredicted RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 DNAI2Q9GZS0 605 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 CXorf56Q9H5V9 222 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 KLHL8Q9P2G9 620 aaPredicted RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 IGSF9Q9P2J2 1179 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 MAGED2Q9UNF1 606 aaPredicted RBP21.97■■□□□ 1.11
CCDC38-201ENST00000344280 RPS6KL1Q9Y6S9 549 aa21.97■■□□□ 1.11
CCDC38-201ENST00000344280 MYADML2A6NDP7 307 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 NCAM1P13591 858 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 CDC25CP30307 473 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 ENDOVQ8N8Q3 282 aaKnown RBP21.96■■□□□ 1.11
CCDC38-201ENST00000344280 EDEM1Q92611 657 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 SYT15Q9BQS2 421 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 TUBB6Q9BUF5 446 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 ENO1P06733 434 aaKnown RBP21.96■■□□□ 1.11
CCDC38-201ENST00000344280 FGF3P11487 239 aaPredicted RBP21.96■■□□□ 1.11
CCDC38-201ENST00000344280 KYAT3Q6YP21 454 aaKnown RBP21.96■■□□□ 1.11
CCDC38-201ENST00000344280 RPAINQ86UA6 219 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 RASSF3Q86WH2 238 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 ZNF358Q9NW07 568 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 ZFATQ9P243 1243 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 SCN4AP35499 1836 aa21.96■■□□□ 1.11
CCDC38-201ENST00000344280 PLIN3O60664 434 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 CLNS1AP54105 237 aaKnown RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 PURAQ00577 322 aaKnown RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 KPNB1Q14974 876 aaKnown RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 WDR60Q8WVS4 1066 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 ATXN7L3BQ96GX2 97 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 THAP1Q9NVV9 213 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 DDIT4Q9NX09 232 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 ZBTB24O43167 697 aaPredicted RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 CELF2O95319 508 aaKnown RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 CD68P34810 354 aaPredicted RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 ALDH18A1P54886 795 aaKnown RBP21.95■■□□□ 1.1
CCDC38-201ENST00000344280 TPI1P60174 286 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 PDE1BQ01064 536 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 PCLAFQ15004 111 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 FAM91A1Q658Y4 838 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 CMC1Q7Z7K0 106 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 RAB3IL1Q8TBN0 382 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 AZIN2Q96A70 460 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 CERS2Q96G23 380 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 FBXW11Q9UKB1 542 aa21.95■■□□□ 1.1
CCDC38-201ENST00000344280 HOXC8P31273 242 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 ARRB2P32121 409 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 ZBTB17Q13105 803 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 FSCN1Q16658 493 aaKnown RBP21.94■■□□□ 1.1
CCDC38-201ENST00000344280 ACSBG2Q5FVE4 666 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 TEDDM1Q5T9Z0 273 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 BHLHA9Q7RTU4 235 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 TEX9Q8N6V9 391 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 PPP1R14CQ8TAE6 165 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 AGAP2Q99490 1192 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 WWP1Q9H0M0 922 aa21.94■■□□□ 1.1
CCDC38-201ENST00000344280 AP5M1Q9H0R1 490 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms