RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 CEP83Q9Y592 693 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 PTPRBP23467 1997 aa13.55□□□□□ -0.24
NECTIN1-203ENST00000341398 TMEM131Q92545 1883 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 APOEP02649 317 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 SRPRAP08240 638 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 KRT5P13647 590 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 SLC6A4P31645 630 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 SGSHP51688 502 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 C21orf59P57076 290 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 HNRNPA1L2Q32P51 320 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 CLEC4CQ8WTT0 213 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 STK32AQ8WU08 396 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 IGSF8Q969P0 613 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 MED15Q96RN5 788 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 OMDQ99983 421 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 RSPH9Q9H1X1 276 aaPredicted RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 CCDC86Q9H6F5 360 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 FBXL12Q9NXK8 326 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 TJP2Q9UDY2 1190 aa13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 FNDC3AQ9Y2H6 1198 aaKnown RBP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
NECTIN1-203ENST00000341398 PLXNB3Q9ULL4 1909 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 LRRC72A6NJI9 287 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 GABBR2O75899 941 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 CSKP41240 450 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 GRK6P43250 576 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 CCT8P50990 548 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 RACK1P63244 317 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 BNC1Q01954 994 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 SCAPQ12770 1279 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 MS4A13Q5J8X5 152 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 KIAA0895LQ68EN5 471 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 PROSER1Q86XN7 944 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 GALNT15Q8N3T1 639 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 DQX1Q8TE96 717 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 FCRL2Q96LA5 508 aaPredicted RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 ACE2Q9BYF1 805 aaPredicted RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 PABPC3Q9H361 631 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 MAN1B1Q9UKM7 699 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 TPX2Q9ULW0 747 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 GOLGA4Q13439 2230 aaKnown RBP13.53□□□□□ -0.24
NECTIN1-203ENST00000341398 MUC22E2RYF6 1773 aaPredicted RBP13.52□□□□□ -0.24
NECTIN1-203ENST00000341398 EDDM13A0A1B0GTR0 161 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 TNFSF14O43557 240 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 SIN3BO75182 1162 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 MOCS2O96007 188 aaPredicted RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC2A3P11169 496 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 GPD2P43304 727 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 RPS24P62847 133 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ARID5BQ14865 1188 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 CST6Q15828 149 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 MEA1Q16626 185 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 NADSYN1Q6IA69 706 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 TTI2Q6NXR4 508 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ENOSF1Q7L5Y1 443 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 DHX40Q8IX18 779 aaKnown RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ATP6V0D2Q8N8Y2 350 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 KAT5Q92993 513 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC39A13Q96H72 371 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 BTN2A3PQ96KV6 586 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ZSWIM1Q9BR11 485 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 LHX6Q9UPM6 363 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 ERVW-1Q9UQF0 538 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 NAALADL1Q9UQQ1 740 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 DMXL2Q8TDJ6 3036 aa13.52□□□□□ -0.25
NECTIN1-203ENST00000341398 A0A1W2PPC4 97 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 GOLGA8CPA6NN73 597 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 PCDHGA12O60330 932 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 RNASEH2AO75792 299 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 FYNP06241 537 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 GALCP54803 685 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 OXCT1P55809 520 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 SNX16P57768 344 aa13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 YWHAZP63104 245 aaKnown RBP13.51□□□□□ -0.25
NECTIN1-203ENST00000341398 SULT2A1Q06520 285 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms