RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ALDH1A2O94788 518 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 PGK1P00558 417 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 NCAM1P13591 858 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 ERCC2P18074 760 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 LHX1P48742 406 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 SARNPP82979 210 aaKnown RBP20.66■□□□□ 0.9
SPG7-202ENST00000341316 RFWD3Q6PCD5 774 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 DSTYKQ6XUX3 929 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 NDUFAF2Q8N183 169 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 NPWQ8N729 165 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 MTBPQ96DY7 904 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 PRR11Q96HE9 360 aaPredicted RBP20.66■□□□□ 0.9
SPG7-202ENST00000341316 SENP6Q9GZR1 1112 aaPredicted RBP20.66■□□□□ 0.9
SPG7-202ENST00000341316 PRDM16Q9HAZ2 1276 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 EIF2B3Q9NR50 452 aaKnown RBP20.66■□□□□ 0.9
SPG7-202ENST00000341316 MKS1Q9NXB0 559 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 HEY2Q9UBP5 337 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 SNX10Q9Y5X0 201 aa20.66■□□□□ 0.9
SPG7-202ENST00000341316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 DUSP11O75319 330 aaKnown RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 NIPAL4Q0D2K0 466 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 TIGD5Q53EQ6 642 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 CAPRIN2Q6IMN6 1127 aaKnown RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 TMEM86AQ8N2M4 240 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 EDEM1Q92611 657 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 RTP3Q9BQQ7 232 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 TMEM120AQ9BXJ8 343 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 CADM1Q9BY67 442 aaKnown RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 ARL8BQ9NVJ2 186 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 SYBUQ9NX95 663 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 IL1RAPL1Q9NZN1 696 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 FBXW11Q9UKB1 542 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 KLF11O14901 512 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 STK10O94804 968 aaKnown RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 HAUS5O94927 633 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 FBXO21O94952 628 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 PTDSS1P48651 473 aaKnown RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 CYS1Q717R9 158 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 PGBD4Q96DM1 585 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 SLC9A7Q96T83 725 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 SLC24A3Q9HC58 644 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 CNGB3Q9NQW8 809 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 FBXO6Q9NRD1 293 aaPredicted RBP20.65■□□□□ 0.9
SPG7-202ENST00000341316 PSAT1Q9Y617 370 aa20.65■□□□□ 0.9
SPG7-202ENST00000341316 MYO18AQ92614 2054 aaKnown RBP20.64■□□□□ 0.9
SPG7-202ENST00000341316 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.9
SPG7-202ENST00000341316 CCDC195A0A1B0GUA6 201 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 MANSC4A6NHS7 340 aaPredicted RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 C9IYK1 514 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 PPP1R12AO14974 1030 aaPredicted RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 HNRNPCL1O60812 293 aaKnown RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 TGDSO95455 350 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 ARFIP2P53365 341 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 GJA9P57773 515 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 PAN2Q504Q3 1202 aaKnown RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 CES3Q6UWW8 571 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 IFNL1Q8IU54 200 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPG7-202ENST00000341316 SOCS4Q8WXH5 440 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 NTAN1Q96AB6 310 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 OSBPL1AQ9BXW6 950 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 DDIT4Q9NX09 232 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 CORO1CQ9ULV4 474 aaPredicted RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 RPL26L1Q9UNX3 145 aaKnown RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 FAM237BA0A1B0GVD1 139 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 LTFP02788 710 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 SERPINB3P29508 390 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 BST1Q10588 318 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 SCAPQ12770 1279 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 UPP1Q16831 310 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 C4orf50Q6ZRC1 276 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 MARK2Q7KZI7 788 aaKnown RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 PID1Q7Z2X4 250 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 SH3TC2Q8TF17 1288 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 APBB2Q92870 758 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 PTCD3Q96EY7 689 aaKnown RBP20.64■□□□□ 0.89
SPG7-202ENST00000341316 SIRPGQ9P1W8 387 aa20.64■□□□□ 0.89
SPG7-202ENST00000341316 MGEA5O60502 916 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 IL1BP01584 269 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 PTPN3P26045 913 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 CRHR1P34998 444 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 SERPINB9P50453 376 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 HSF5Q4G112 596 aaPredicted RBP20.63■□□□□ 0.89
SPG7-202ENST00000341316 TIFABQ6ZNK6 161 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 C20orf27Q9GZN8 174 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 IGSF9Q9P2J2 1179 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 CDH9Q9ULB4 789 aa20.63■□□□□ 0.89
SPG7-202ENST00000341316 CCDC22O60826 627 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 USP12O75317 370 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 ALDOAP04075 364 aaKnown RBP20.62■□□□□ 0.89
SPG7-202ENST00000341316 TPI1P60174 286 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 MGAT3Q09327 533 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 CHI3L2Q15782 390 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 KHDC1Q4VXA5 237 aaKnown RBP20.62■□□□□ 0.89
SPG7-202ENST00000341316 TEX44Q53QW1 395 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 PACS1Q6VY07 963 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 MYLPFQ96A32 169 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 SKA1Q96BD8 255 aa20.62■□□□□ 0.89
SPG7-202ENST00000341316 AGAP3Q96P47 875 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms