RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CLOCKO15516 846 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 CYP2A6P11509 494 aaPredicted RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 HPCAL1P37235 193 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 CAP2P40123 477 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 NT5MQ9NPB1 228 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TNPO3Q9Y5L0 923 aaKnown RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 IDH3BO43837 385 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 PLEKP08567 350 aaPredicted RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 TGFB3P10600 412 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 EZH2Q15910 746 aaKnown RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 MIB1Q86YT6 1006 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 SYTL1Q8IYJ3 562 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TCAIMQ8N3R3 496 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 SERPINB11Q96P15 392 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 ASB7Q9H672 318 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TMEM216Q9P0N5 145 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 UBOX5O94941 541 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 MYL4P12829 197 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 CHRNA5P30532 468 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 MACC1Q6ZN28 852 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 NIPA1Q7RTP0 329 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 IZUMO1Q8IYV9 350 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 OXNAD1Q96HP4 312 aaPredicted RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 ACOX2Q99424 681 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 RBM22Q9NW64 420 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLCS-201ENST00000336648 PLA2G4CQ9UP65 541 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 ERI2A8K979 691 aaKnown RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 RGS14O43566 566 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 PSMD4P55036 377 aaKnown RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 HERVK_113P62684 666 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 EFEMP1Q12805 493 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 XRCC4Q13426 336 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 N4BP2L1Q5TBK1 243 aaPredicted RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 SLC16A10Q8TF71 515 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 C1orf50Q9BV19 199 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
HLCS-201ENST00000336648 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
HLCS-201ENST00000336648 CCDC154A6NI56 674 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 RBAK-RBAKDNI3L0D1 243 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 HOXB6P17509 224 aaKnown RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 FASTKQ14296 549 aaKnown RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 NEK5Q6P3R8 708 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 KIAA0408Q6ZU52 694 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 MCOLN2Q8IZK6 566 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 ACTL9Q8TC94 416 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 ROGDIQ9GZN7 287 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 JCADQ9P266 1359 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 MYL12BO14950 172 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 TSHRP16473 764 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 ABATP80404 500 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 KCNMB4Q86W47 210 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 MAGEC3Q8TD91 643 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 EFCAB10A6NFE3 127 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 MRASO14807 208 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 UQCRBP14927 111 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 TKTL1P51854 596 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 WDR60Q8WVS4 1066 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 PGM2Q96G03 612 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 MNTQ99583 582 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 GALNT8Q9NY28 637 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 SRRM3A6NNA2 597 aaPredicted RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 RAMP2O60895 175 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 ETS1P14921 441 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 YY1P25490 414 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 CASP4P49662 377 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 FRG1Q14331 258 aaKnown RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 IRGCQ6NXR0 463 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 DSG4Q86SJ6 1040 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 GDPD5Q8WTR4 605 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 CHID1Q9BWS9 393 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 CAPN10Q9HC96 672 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 STARP49675 285 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 INTS11Q5TA45 600 aaKnown RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 MZT2AQ6P582 158 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 METTL7BQ6UX53 244 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 ZNF571Q7Z3V5 609 aaPredicted RBP13.34□□□□□ -0.27
HLCS-201ENST00000336648 DHRSXQ8N5I4 330 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 HTR3CQ8WXA8 447 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 SEMA6BQ9H3T3 888 aa13.34□□□□□ -0.27
HLCS-201ENST00000336648 NOS3P29474 1203 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 TGFBR2P37173 567 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 CCDC157Q569K6 752 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms