RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CXCL16Q9H2A7 254 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 XPNPEP3Q9NQH7 507 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 PCDHGB4Q9UN71 923 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 AP4E1Q9UPM8 1137 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 PCDHGB5Q9Y5G0 923 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 MYO18AQ92614 2054 aaKnown RBP20.45■□□□□ 0.86
CDCA4-201ENST00000336219 SF3B1O75533 1304 aaKnown RBP eCLIP20.45■□□□□ 0.863e-10■■■■■ 89.1
CDCA4-201ENST00000336219 PPEF2O14830 753 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 PLIN3O60664 434 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 PDK3Q15120 406 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 GRAMD1BQ3KR37 738 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 BSPRYQ5W0U4 402 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 CLEC4CQ8WTT0 213 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 CENPIQ92674 756 aaPredicted RBP20.45■□□□□ 0.86
CDCA4-201ENST00000336219 CLIC5Q9NZA1 410 aa20.45■□□□□ 0.86
CDCA4-201ENST00000336219 DCXO43602 365 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 KLHL2O95198 593 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 GRM5P41594 1212 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 SNX16P57768 344 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 USP4Q13107 963 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 HEATR6Q6AI08 1181 aaKnown RBP20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CYS1Q717R9 158 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 AGR3Q8TD06 166 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CLMNQ96JQ2 1002 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CSPG4P5Q96PW8 444 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 GTF2IRD1Q9UHL9 959 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 RALGAPA2Q2PPJ7 1873 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CAPN8A6NHC0 703 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 H3BNX3 289 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CNTFP26441 200 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 TBL3Q12788 808 aaKnown RBP20.44■□□□□ 0.86
CDCA4-201ENST00000336219 CES3Q6UWW8 571 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 ACTRT2Q8TDY3 377 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 KCTD15Q96SI1 283 aaPredicted RBP20.44■□□□□ 0.86
CDCA4-201ENST00000336219 GCOM2Q9BZD3 368 aaPredicted RBP20.44■□□□□ 0.86
CDCA4-201ENST00000336219 ACSS2Q9NR19 701 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 DTLQ9NZJ0 730 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 TMEM216Q9P0N5 145 aa20.44■□□□□ 0.86
CDCA4-201ENST00000336219 ZNF195O14628 629 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 SESN2P58004 480 aaPredicted RBP20.43■□□□□ 0.86
CDCA4-201ENST00000336219 LSAMPQ13449 338 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 STEAP4Q687X5 459 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 NCBP2-AS2Q69YL0 99 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 SLC26A9Q7LBE3 791 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 GPC2Q8N158 579 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 MOCOSQ96EN8 888 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 HAPLN3Q96S86 360 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 LPIN3Q9BQK8 851 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 CEP41Q9BYV8 373 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 SORCS3Q9UPU3 1222 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 E9PBE3 544 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ZBTB14O43829 449 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 KLHL41O60662 606 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ATP5BP06576 529 aaKnown RBP20.43■□□□□ 0.86
CDCA4-201ENST00000336219 PYGLP06737 847 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 LAMC2Q13753 1193 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ITGA9Q13797 1035 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 PACS1Q6VY07 963 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ATXN7L3BQ96GX2 97 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ZMAT2Q96NC0 199 aaKnown RBP20.43■□□□□ 0.86
CDCA4-201ENST00000336219 OLFM3Q96PB7 478 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 VCX3BQ9H321 246 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 VCX3AQ9NNX9 186 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 INPP5FQ9Y2H2 1132 aa20.43■□□□□ 0.86
CDCA4-201ENST00000336219 ALDH1A2O94788 518 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 PABPC4LP0CB38 370 aaKnown RBP20.42■□□□□ 0.86
CDCA4-201ENST00000336219 VAV1P15498 845 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 FOLH1Q04609 750 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 BTKQ06187 659 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 GRM2Q14416 872 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 PDCD2Q16342 344 aaPredicted RBP20.42■□□□□ 0.86
CDCA4-201ENST00000336219 ARHGAP17Q68EM7 881 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 TNS4Q8IZW8 715 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 CCDC185Q8N715 623 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 PGBD4Q96DM1 585 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 CXCL11O14625 94 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 SERPINE1P05121 402 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 ZNF286BP0CG31 522 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 DBN1Q16643 649 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 SOWAHAQ2M3V2 549 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 UGT2A3Q6UWM9 527 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 ARMCX2Q7L311 632 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 SPATA24Q86W54 205 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 ERO1BQ86YB8 467 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 HTR3CQ8WXA8 447 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 PPP1R36Q96LQ0 422 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 DPEP3Q9H4B8 488 aa20.42■□□□□ 0.86
CDCA4-201ENST00000336219 COL1A2P08123 1366 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 ADM5C9JUS6 153 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 MSX2P35548 267 aaPredicted RBP20.41■□□□□ 0.86
CDCA4-201ENST00000336219 NIPAL4Q0D2K0 466 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 STXBP5Q5T5C0 1151 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 CMC1Q7Z7K0 106 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 FBXW8Q8N3Y1 598 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 PPP4R1Q8TF05 950 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 MROH8Q9H579 483 aa20.41■□□□□ 0.86
CDCA4-201ENST00000336219 MORF4L1Q9UBU8 362 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms