RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ATG16L1Q676U5 607 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 ZDHHC17Q8IUH5 632 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 PLD6Q8N2A8 252 aaKnown RBP15.25■□□□□ 0.03
UBA1-201ENST00000335972 MFSD3Q96ES6 412 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 DDIT4Q9NX09 232 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 MIOSQ9NXC5 875 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 SIRPGQ9P1W8 387 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 CPSF2Q9P2I0 782 aaKnown RBP15.25■□□□□ 0.03
UBA1-201ENST00000335972 PLXNB2O15031 1838 aa15.25■□□□□ 0.03
UBA1-201ENST00000335972 SORBS2O94875 1100 aaKnown RBP15.24■□□□□ 0.03
UBA1-201ENST00000335972 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 PAX7P23759 505 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 TYK2P29597 1187 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 MAGEA6P43360 314 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 PSEN2P49810 448 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 CLCNKBP51801 687 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 PNPLA1Q8N8W4 532 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 C3orf58Q8NDZ4 430 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 ZNF398Q8TD17 642 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 TXNDC16Q9P2K2 825 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 XPO1O14980 1071 aaKnown RBP15.24■□□□□ 0.03
UBA1-201ENST00000335972 ZBTB24O43167 697 aaPredicted RBP15.24■□□□□ 0.03
UBA1-201ENST00000335972 F2P00734 622 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 ITGA2BP08514 1039 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 IRF9Q00978 393 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 MAN1C1Q9NR34 630 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 LNPEPQ9UIQ6 1025 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 DERAQ9Y315 318 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 HTTP42858 3142 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 GSRP00390 522 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 CRHR1P34998 444 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 CCNFP41002 786 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 SLC8A3P57103 927 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 SARNPP82979 210 aaKnown RBP15.24■□□□□ 0.03
UBA1-201ENST00000335972 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 SV2CQ496J9 727 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 NAF1Q96HR8 494 aaKnown RBP15.24■□□□□ 0.03
UBA1-201ENST00000335972 SENP8Q96LD8 212 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 YY1AP1Q9H869 796 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 PACSIN3Q9UKS6 424 aa15.24■□□□□ 0.03
UBA1-201ENST00000335972 LOC100653049A0A140TA62 436 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 MYADML2A6NDP7 307 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 KRT34O76011 436 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 C6orf222P0C671 652 aaPredicted RBP15.23■□□□□ 0.03
UBA1-201ENST00000335972 CD1EP15812 388 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 STRADAQ7RTN6 431 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 HIPK4Q8NE63 616 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 NRG4Q8WWG1 115 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 HSFY1Q96LI6 401 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SMOQ99835 787 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 ACADSBP45954 432 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 CCR10P46092 362 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 TPI1P60174 286 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SLC25A3Q00325 362 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 USP4Q13107 963 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 WNT8BQ93098 351 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 LRRC39Q96DD0 335 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 PCED1BQ96HM7 432 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 NPY6RQ99463 290 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SHROOM3Q8TF72 1996 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SMIM35A0A1B0GVV1 85 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 TRAFD1O14545 582 aaPredicted RBP15.23■□□□□ 0.03
UBA1-201ENST00000335972 STK10O94804 968 aaKnown RBP15.23■□□□□ 0.03
UBA1-201ENST00000335972 TGDSO95455 350 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 SLC1A6P48664 564 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 LRRC8BQ6P9F7 803 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 RNF34Q969K3 372 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 FRMD8Q9BZ67 464 aaPredicted RBP15.23■□□□□ 0.03
UBA1-201ENST00000335972 CYP4F11Q9HBI6 524 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 CHRAC1Q9NRG0 131 aa15.23■□□□□ 0.03
UBA1-201ENST00000335972 DICER1Q9UPY3 1922 aaKnown RBP15.22■□□□□ 0.03
UBA1-201ENST00000335972 TTC3P53804 2025 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 FAM200BP0CF97 657 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 FGF3P11487 239 aaPredicted RBP15.22■□□□□ 0.03
UBA1-201ENST00000335972 PTPN3P26045 913 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 NOS2P35228 1153 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 ADRA1BP35368 520 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 AVPR1AP37288 418 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 ZBTB17Q13105 803 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 MUM1Q2TAK8 710 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 RWDD4Q6NW29 188 aaKnown RBP15.22■□□□□ 0.03
UBA1-201ENST00000335972 ARHGAP36Q6ZRI8 547 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 OTOP3Q7RTS5 596 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 STRA8Q7Z7C7 330 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 SPATA6LQ8N4H0 392 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 HNRNPABQ99729 332 aaKnown RBP15.22■□□□□ 0.03
UBA1-201ENST00000335972 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
UBA1-201ENST00000335972 GDAP2Q9NXN4 497 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 F8W810 466 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 TBX10O75333 385 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 DAB1O75553 588 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 NIPAL4Q0D2K0 466 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 PDK1Q15118 436 aa15.22■□□□□ 0.03
UBA1-201ENST00000335972 TEDDM1Q5T9Z0 273 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms