RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TSPAN18Q96SJ8 248 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 TBCBQ99426 244 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ACSS2Q9NR19 701 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF358Q9NW07 568 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 PCDHA11Q9Y5I1 949 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 KLF11O14901 512 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 TCHHL1Q5QJ38 904 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 CES4AQ5XG92 561 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 LRRC8BQ6P9F7 803 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 CYP4V2Q6ZWL3 525 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 HACE1Q8IYU2 909 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 INIPQ9NRY2 104 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 SIRPGQ9P1W8 387 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 KLHL8Q9P2G9 620 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 KIAA1257Q9ULG3 409 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMEM221A6NGB7 291 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ATP9BO43861 1147 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 HSPA4LO95757 839 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZFXP17010 805 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 DSG1Q02413 1049 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 CMC1Q7Z7K0 106 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 CCDC185Q8N715 623 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF670Q9BS34 389 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 PNPLA8Q9NP80 782 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 XPNPEP3Q9NQH7 507 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ENDOD1O94919 500 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 SERPINA6P08185 405 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 COPAP53621 1224 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 BTG3Q14201 252 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 Q3C1V9 767 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 C6orf183Q5T699 404 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 CATSPER4Q7RTX7 472 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 GCOM2Q9BZD3 368 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 DPEP3Q9H4B8 488 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 ITGA11Q9UKX5 1188 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 PPM1HQ9ULR3 514 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 EVPLQ92817 2033 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 IGKV6-21A0A0C4DH24 114 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 E9PBE3 544 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 NEMP1O14524 444 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 KLHL41O60662 606 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 OLIG2Q13516 323 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 GRAMD1BQ3KR37 738 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 RABGAP1LQ5R372 815 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF554Q86TJ5 538 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 GATA6Q92908 595 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 CSPG4P5Q96PW8 444 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 APOL2Q9BQE5 337 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 DCXO43602 365 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 MAGEC1O60732 1142 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 GLRA3O75311 464 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 HOXD12P35452 270 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 SULT1E1P49888 294 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 STILQ15468 1287 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 RAPH1Q70E73 1250 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 AFG1LQ8WV93 481 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 CENPOQ9BU64 300 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 OXCT2Q9BYC2 517 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 FAM192AQ9GZU8 254 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 SNX25Q9H3E2 840 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMPRSS4Q9NRS4 437 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 DTLQ9NZJ0 730 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 PSAT1Q9Y617 370 aa16.94■□□□□ 0.3
CDC42EP4-201ENST00000335793 RALBP11234 206 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 VARSP26640 1264 aaKnown RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 L1CAMP32004 1257 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 ATXN3P54252 364 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 PDE1CQ14123 709 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 HSF5Q4G112 596 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 SLC9A4Q6AI14 798 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 MCUQ8NE86 351 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 GOLGA8QA0A0J9YX86 632 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 GOLGA8OA6NCC3 632 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 GOLGA8NF8WBI6 632 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 RNF103O00237 685 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 CFLARO15519 480 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 PFKMP08237 780 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 EDNRBP24530 442 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 PSMB4P28070 264 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 GARSP41250 739 aaKnown RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 EFHC1Q5JVL4 640 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 NXNQ6DKJ4 435 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 PACS1Q6VY07 963 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 CCDC80Q76M96 950 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 SHKBP1Q8TBC3 707 aa16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF669Q96BR6 464 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMA7Q9Y2S6 64 aaKnown RBP16.93■□□□□ 0.3
CDC42EP4-201ENST00000335793 HMX2A2RU54 273 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms