RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TFDP2Q14188 446 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 CCL14Q16627 93 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 KLC3Q6P597 504 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 RNF111Q6ZNA4 994 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 SLC7A8Q9UHI5 535 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 SLC24A2Q9UI40 661 aa14.28□□□□□ -0.12
SF1-202ENST00000334944 PLXNA1Q9UIW2 1896 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 PRPF4O43172 522 aaKnown RBP eCLIP14.27□□□□□ -0.122e-6■■■□□ 15.3
SF1-202ENST00000334944 ENDOD1O94919 500 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 MT-ND3P03897 115 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 GNL1P36915 607 aaPredicted RBP14.27□□□□□ -0.12
SF1-202ENST00000334944 NDUFV1P49821 464 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 EMP3P54852 163 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.12
SF1-202ENST00000334944 KCNJ11Q14654 390 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 NADK2Q4G0N4 442 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 PKDCCQ504Y2 493 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 FBXL19Q6PCT2 694 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 ADGRD1Q6QNK2 874 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 TP53INP2Q8IXH6 220 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 ARRDC4Q8NCT1 418 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 ADAM32Q8TC27 787 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 KBTBD7Q8WVZ9 684 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 GAB3Q8WWW8 586 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 GCNAQ96QF7 691 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 ARHGEF4Q9NR80 690 aa14.27□□□□□ -0.12
SF1-202ENST00000334944 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 BEST1O76090 585 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 INHBAP08476 426 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 RARBP10826 455 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 MYL2P10916 166 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 GOT1P17174 413 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 PAX3P23760 479 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
SF1-202ENST00000334944 GK3PQ14409 553 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 PDK3Q15120 406 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.13
SF1-202ENST00000334944 METTL25Q8N6Q8 603 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 TBCBQ99426 244 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 LGMNQ99538 433 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.13
SF1-202ENST00000334944 SHCBP1LQ9BZQ2 653 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 IL1RAPL1Q9NZN1 696 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 FLRT1Q9NZU1 646 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 APPL1Q9UKG1 709 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 TBC1D30Q9Y2I9 924 aa14.27□□□□□ -0.13
SF1-202ENST00000334944 TIMM13Q9Y5L4 95 aaPredicted RBP14.27□□□□□ -0.13
SF1-202ENST00000334944 ARHGAP42A6NI28 874 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 E7ESA3 106 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 KITP10721 976 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 VCLP18206 1134 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CRABP2P29373 138 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 STIP1P31948 543 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 GJA8P48165 433 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 AP2B1P63010 937 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 IRX4P78413 519 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 FBXO47Q5MNV8 452 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 B3GNT6Q6ZMB0 384 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CDHR3Q6ZTQ4 885 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 ACAD11Q709F0 780 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
SF1-202ENST00000334944 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 SLC26A7Q8TE54 656 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 MZB1Q8WU39 189 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 DGCR14Q96DF8 476 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 MTBPQ96DY7 904 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 MECRQ9BV79 373 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 TRIM55Q9BYV6 548 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 ZC3H7BQ9UGR2 993 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 TEX264Q9Y6I9 313 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 LPXNO60711 386 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CAPN15O75808 1086 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 EPHB1P54762 984 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 ASPHQ12797 758 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CYLC2Q14093 348 aaPredicted RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 BOLA3Q53S33 107 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 KCNT2Q6UVM3 1135 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 DENND5BQ6ZUT9 1274 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 TMEM110Q86TL2 294 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CAND1Q86VP6 1230 aaKnown RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 ZFP28Q8NHY6 868 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 ABHD16BQ9H3Z7 469 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 ZNF395Q9H8N7 513 aaPredicted RBP14.26□□□□□ -0.13
SF1-202ENST00000334944 SMYD2Q9NRG4 433 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 CCDC195A0A1B0GUA6 201 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 KPNA7A9QM74 516 aa14.26□□□□□ -0.13
SF1-202ENST00000334944 FOXD2O60548 495 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms