RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 KCTD11Q693B1 232 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 ITPRIPL1Q6GPH6 555 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 TMEM135Q86UB9 458 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 ARID3BQ8IVW6 561 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 OR6Y1Q8NGX8 325 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 MCUR1Q96AQ8 359 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CERS2Q96G23 380 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 LGMNQ99538 433 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 TRIM62Q9BVG3 475 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CCDC106Q9BWC9 280 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 WDR6Q9NNW5 1121 aaKnown RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CASS4Q9NQ75 786 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 NKX1-2Q9UD57 310 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 TAGLN3Q9UI15 199 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 EMCNQ9ULC0 261 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 MFHAS1Q9Y4C4 1052 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PSMD3O43242 534 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PROCP04070 461 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 FGF3P11487 239 aaPredicted RBP11.02□□□□□ -0.64
CCDC172-201ENST00000333254 ACADSP16219 412 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PTPN3P26045 913 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 MGAT1P26572 445 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PSMB4P28070 264 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 HTR7P34969 479 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 SERPINB6P35237 376 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 NPY2RP49146 381 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 HARS2P49590 506 aaKnown RBP11.02□□□□□ -0.64
CCDC172-201ENST00000333254 GALNT2Q10471 571 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PDE1CQ14123 709 aaPredicted RBP11.02□□□□□ -0.64
CCDC172-201ENST00000333254 HIC1Q14526 733 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 ARL13BQ3SXY8 428 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.64
CCDC172-201ENST00000333254 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 SPRYD7Q5W111 196 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 CES4AQ5XG92 561 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 APLFQ8IW19 511 aaPredicted RBP11.02□□□□□ -0.64
CCDC172-201ENST00000333254 RBBP8Q99708 897 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 MECRQ9BV79 373 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 APOL6Q9BWW8 343 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 MAGEB5Q9BZ81 275 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 SLC13A1Q9BZW2 595 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 GBA3Q9H227 469 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 CHST12Q9NRB3 414 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 PIGVQ9NUD9 493 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 MID2Q9UJV3 735 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 FBXW11Q9UKB1 542 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 CDH9Q9ULB4 789 aa11.02□□□□□ -0.64
CCDC172-201ENST00000333254 TPP1O14773 563 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TREHO43280 583 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 KPNA6O60684 536 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 H2AFYO75367 372 aaKnown RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 KLHL2O95198 593 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 MPOP05164 745 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 FYNP06241 537 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 ATP6V1C1P21283 382 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 RPL9P32969 192 aaKnown RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 SERPINB8P50452 374 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TKTL1P51854 596 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 LIMK2P53671 638 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 AP1B1Q10567 949 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 PCLAFQ15004 111 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TSNAXIP1Q2TAA8 658 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TRMT5Q32P41 509 aaKnown RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 N4BP2L1Q5TBK1 243 aaPredicted RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 RINLQ6ZS11 566 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 NET1Q7Z628 596 aaPredicted RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 FAM35AQ86V20 835 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 CCDC117Q8IWD4 279 aaPredicted RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 ARRDC4Q8NCT1 418 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 DPF3Q92784 378 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 PGBD4Q96DM1 585 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 NAF1Q96HR8 494 aaKnown RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TSGA13Q96PP4 275 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 PPP1R2P1Q96PQ5 205 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 SYT15Q9BQS2 421 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 MCMBPQ9BTE3 642 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 CSNK1G1Q9HCP0 422 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 SYBUQ9NX95 663 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 BFARQ9NZS9 450 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 KLK14Q9P0G3 267 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 ZFATQ9P243 1243 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 STX18Q9P2W9 335 aaKnown RBP11.01□□□□□ -0.65
CCDC172-201ENST00000333254 PLA2G4CQ9UP65 541 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 SPECC1L-ADORA2AF8WAN1 911 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 CACNG3O60359 315 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 TM7SF2O76062 418 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 LTFP02788 710 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 PRKCGP05129 697 aa11.01□□□□□ -0.65
CCDC172-201ENST00000333254 YBX3P16989 372 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms