RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 INHBBP09529 407 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF12P17014 697 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 GRIA1P42261 906 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 JAK3P52333 1124 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CDH6P55285 790 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 VPS72Q15906 364 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF829Q3KNS6 432 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 SLC4A11Q8NBS3 891 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 RP9Q8TA86 221 aaKnown RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 LRRN4Q8WUT4 740 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ATP2A3Q93084 1043 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ATP6V1E2Q96A05 226 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 SEMA6AQ9H2E6 1030 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 WDR41Q9HAD4 459 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ITGB1BP2Q9UKP3 347 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 TMED5Q9Y3A6 229 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 GOLGA8QA0A0J9YX86 632 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 GOLGA8OA6NCC3 632 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 SOBPA7XYQ1 873 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 GOLGA8NF8WBI6 632 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 STBD1O95210 358 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 ATE1O95260 518 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 METTL18O95568 372 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 AMHP03971 560 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 OCM2P0CE71 109 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 OCMP0CE72 109 aaPredicted RBP13.09□□□□□ -0.31
CCDC60-201ENST00000327554 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
CCDC60-201ENST00000327554 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
CCDC60-201ENST00000327554 PRKG1Q13976 671 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 TFDP2Q14188 446 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 INSCQ1MX18 579 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 RAB6CQ53S08 254 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 FAM47CQ5HY64 1035 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
CCDC60-201ENST00000327554 STEAP4Q687X5 459 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 CYS1Q717R9 158 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 GPR141Q7Z602 305 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 MYO1HQ8N1T3 1032 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 RAB6CQ9H0N0 254 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF385DQ9H6B1 395 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 CLK4Q9HAZ1 481 aaKnown RBP13.09□□□□□ -0.31
CCDC60-201ENST00000327554 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 FADS3Q9Y5Q0 445 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 PSAT1Q9Y617 370 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 PTPRFP10586 1907 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 BTAF1O14981 1849 aa13.09□□□□□ -0.31
CCDC60-201ENST00000327554 FAM155AB1AL88 458 aaPredicted RBP13.08□□□□□ -0.31
CCDC60-201ENST00000327554 NFIBO00712 420 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 XPOTO43592 962 aaKnown RBP13.08□□□□□ -0.31
CCDC60-201ENST00000327554 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.31
CCDC60-201ENST00000327554 DCAF6Q58WW2 860 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 KRT80Q6KB66 452 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 NANOGP8Q6NSW7 305 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 TBC1D15Q8TC07 691 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 RNF157Q96PX1 679 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 CPXM1Q96SM3 734 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 ANKRD60Q9BZ19 345 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 WDR55Q9H6Y2 383 aaPredicted RBP13.08□□□□□ -0.31
CCDC60-201ENST00000327554 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 TMX2Q9Y320 296 aa13.08□□□□□ -0.31
CCDC60-201ENST00000327554 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
CCDC60-201ENST00000327554 K7EPI3 171 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 MAP3K6O95382 1288 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 HSPA4LO95757 839 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ERBB2P04626 1255 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 PROZP22891 400 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
CCDC60-201ENST00000327554 SFNP31947 248 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 KCNC4Q03721 635 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ZNF362Q5T0B9 420 aaPredicted RBP13.08□□□□□ -0.32
CCDC60-201ENST00000327554 OGFOD2Q6N063 350 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 RSBN1LQ6PCB5 846 aaPredicted RBP13.08□□□□□ -0.32
CCDC60-201ENST00000327554 LYSMD3Q7Z3D4 306 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 PQLC3Q8N755 202 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ZSCAN18Q8TBC5 510 aaPredicted RBP13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 LRTOMTQ8WZ04 291 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ITPKCQ96DU7 683 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 ARMC7Q9H6L4 198 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms