RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 GNA15P30679 374 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 ACSL1P33121 698 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 MATKP42679 507 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 SLC12A1Q13621 1099 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 HNRNPA1L2Q32P51 320 aaKnown RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 SYPL2Q5VXT5 272 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 TRIM65Q6PJ69 517 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 GBP6Q6ZN66 633 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 DBX2Q6ZNG2 339 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 GLRX5Q86SX6 157 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 FAM124AQ86V42 546 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 NAXDQ8IW45 347 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 WFDC5Q8TCV5 224 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 GATA6Q92908 595 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 PRICKLE1Q96MT3 831 aaPredicted RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 STIM2Q9P246 746 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 NCKAP1Q9Y2A7 1128 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 ZZEF1O43149 2961 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 THAP12O43422 761 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 LUC7L3O95232 432 aaKnown RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 SEMA4FO95754 770 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 TOP3BO95985 862 aaKnown RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 IGLV3-25P01717 112 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 CSKP41240 450 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 SNX16P57768 344 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 RPS24P62847 133 aaKnown RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 EIF4EBP2Q13542 120 aaPredicted RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 CDH18Q13634 790 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 TEAD4Q15561 434 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 DCAF6Q58WW2 860 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 TAC4Q86UU9 113 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 CARNMT1Q8N4J0 409 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 ZNF366Q8N895 744 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 MYO19Q96H55 970 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 NUCKS1Q9H1E3 243 aaKnown RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 ASNSD1Q9NWL6 643 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 APEX2Q9UBZ4 518 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 TJP2Q9UDY2 1190 aa18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 INTS6Q9UL03 887 aaKnown RBP18.33■□□□□ 0.52
PTPMT1-201ENST00000326656 NUMA1Q14980 2115 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 E5RJQ4 531 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 HYAL3O43820 417 aaPredicted RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 TRUB2O95900 331 aaKnown RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 SPINK2P20155 84 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 CD27P26842 260 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 OXCT1P55809 520 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 UBE2HP62256 183 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 FAM193AP78312 1265 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 SUZ12Q15022 739 aaKnown RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 HLA-BQ31612 363 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 EFHC1Q5JVL4 640 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 RAB44Q7Z6P3 723 aaPredicted RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 CACUL1Q86Y37 369 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 ATP6V0D2Q8N8Y2 350 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 MLKLQ8NB16 471 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 C6orf106Q9H6K1 298 aaPredicted RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 GAREM1Q9H706 876 aa18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 TPX2Q9ULW0 747 aaKnown RBP18.32■□□□□ 0.52
PTPMT1-201ENST00000326656 CABIN1Q9Y6J0 2220 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ITIH6Q6UXX5 1313 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 KCNU1A8MYU2 1149 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 DFNA5O60443 496 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 CBFA2T3O75081 653 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 GRIA4P48058 902 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 CDK17Q00537 523 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ECT2LQ008S8 904 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 BNC1Q01954 994 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 PDCLQ13371 301 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ZC3H12AQ5D1E8 599 aaKnown RBP18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 PITRM1Q5JRX3 1037 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 TTC39BQ5VTQ0 682 aaPredicted RBP18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ADAM32Q8TC27 787 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ADAMTS14Q8WXS8 1223 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 SHC3Q92529 594 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 BIRC7Q96CA5 298 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 MRGPRX3Q96LB0 322 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 NOX5Q96PH1 765 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 CRACR2AQ9BSW2 395 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 TM7SF3Q9NS93 570 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 TMEM51Q9NW97 253 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 CYTH4Q9UIA0 394 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 PCOLCE2Q9UKZ9 415 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ZMIZ1Q9ULJ6 1067 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 PCDHGC3Q9UN70 934 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 ERVW-1Q9UQF0 538 aa18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 APOBEC2Q9Y235 224 aaKnown RBP18.31■□□□□ 0.52
PTPMT1-201ENST00000326656 EDDM13A0A1B0GTR0 161 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 BECN2A8MW95 431 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 FLRT2O43155 660 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 SLC9A1P19634 815 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 TACR2P21452 398 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 NNMTP40261 264 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 CSNK1EP49674 416 aaKnown RBP18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 VASPP50552 380 aaPredicted RBP18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 PLK1P53350 603 aa18.3■□□□□ 0.52
PTPMT1-201ENST00000326656 PTK2Q05397 1052 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms