RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IFT43Q96FT9 208 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 CPNE1Q99829 537 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 GDAP2Q9NXN4 497 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 RNF103O00237 685 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 ITM2AO43736 263 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 POLBP06746 335 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 CCDC130P13994 396 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 MX2P20592 715 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 PRDX6P30041 224 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 GP5P40197 560 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 RPL10AP62906 217 aaKnown RBP20.4■□□□□ 0.86
SOX2-201ENST00000325404 BTKQ06187 659 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 UBAP2LQ14157 1087 aaKnown RBP20.4■□□□□ 0.86
SOX2-201ENST00000325404 PAFAH1B3Q15102 231 aaKnown RBP20.4■□□□□ 0.86
SOX2-201ENST00000325404 UCMAQ8WVF2 138 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 NT5C3BQ969T7 300 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 P2RY11Q96G91 374 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 APOL6Q9BWW8 343 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 DLGAP2Q9P1A6 1054 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 RAD54BQ9Y620 910 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
SOX2-201ENST00000325404 KIF3CO14782 793 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 PRKCGP05129 697 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 MGAT1P26572 445 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 HOXA11P31270 313 aaPredicted RBP20.39■□□□□ 0.85
SOX2-201ENST00000325404 IRF5Q13568 498 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 C16orf46Q6P387 395 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 SORT1Q99523 831 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 SNTG2Q9NY99 539 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 PDP2Q9P2J9 529 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 COPG2Q9UBF2 871 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 UBQLN1Q9UMX0 589 aaKnown RBP20.39■□□□□ 0.85
SOX2-201ENST00000325404 SCN1AP35498 2009 aa20.39■□□□□ 0.85
SOX2-201ENST00000325404 PIRO00625 290 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 SIN3BO75182 1162 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 DAB1O75553 588 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 CD4P01730 458 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 SLC10A3P09131 477 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
SOX2-201ENST00000325404 TUBP50607 506 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 PDE1BQ01064 536 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 MARCH8Q5T0T0 291 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 PGM2L1Q6PCE3 622 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 KBTBD2Q8IY47 623 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 C7orf31Q8N865 590 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 KBTBD7Q8WVZ9 684 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 TRAPPC9Q96Q05 1148 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 LGMNQ99538 433 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 DPEP3Q9H4B8 488 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 TUBGCP4Q9UGJ1 667 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 XPO1O14980 1071 aaKnown RBP20.38■□□□□ 0.85
SOX2-201ENST00000325404 ADCY6O43306 1168 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 TOP3BO95985 862 aaKnown RBP20.38■□□□□ 0.85
SOX2-201ENST00000325404 LCP1P13796 627 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 GNL1P36915 607 aaPredicted RBP20.38■□□□□ 0.85
SOX2-201ENST00000325404 IDH3AP50213 366 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 COPAP53621 1224 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 INHBEP58166 350 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 ABCE1P61221 599 aaKnown RBP20.38■□□□□ 0.85
SOX2-201ENST00000325404 DSG1Q02413 1049 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 GRIK4Q16099 956 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 MDH1BQ5I0G3 518 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 C17orf99Q6UX52 265 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 UNC5BQ8IZJ1 945 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 JADE3Q92613 823 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 CMTM5Q96DZ9 223 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 MAGEB5Q9BZ81 275 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 YIPF3Q9GZM5 350 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 KAT6AQ92794 2004 aa20.38■□□□□ 0.85
SOX2-201ENST00000325404 ZNF195O14628 629 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 MFSD11O43934 449 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 PNPLA4P41247 253 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 DEUP1Q05D60 604 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 ZDHHC7Q9NXF8 308 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 TXNDC16Q9P2K2 825 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 DYNC1LI2O43237 492 aaPredicted RBP20.37■□□□□ 0.85
SOX2-201ENST00000325404 LYPLA1O75608 230 aaPredicted RBP20.37■□□□□ 0.85
SOX2-201ENST00000325404 RALBP11234 206 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 SESN2P58004 480 aaPredicted RBP20.37■□□□□ 0.85
SOX2-201ENST00000325404 HNRNPDQ14103 355 aaKnown RBP20.37■□□□□ 0.85
SOX2-201ENST00000325404 FBXO47Q5MNV8 452 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 PRAMEF19Q5SWL8 479 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 C10orf107Q8IVU9 208 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 CCDC33Q8N5R6 958 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 ACTRT2Q8TDY3 377 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 RNF139Q8WU17 664 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 CERS2Q96G23 380 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 CLPTM1LQ96KA5 538 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 ZNF560Q96MR9 790 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 ECSITQ9BQ95 431 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 ADAMTS10Q9H324 1103 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 S100A14Q9HCY8 104 aa20.37■□□□□ 0.85
SOX2-201ENST00000325404 KCNA4P22459 653 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 ADORA2BP29275 332 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 AIF1P55008 147 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 IRX4P78413 519 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 XIAPP98170 497 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 RASSF3Q86WH2 238 aa20.36■□□□□ 0.85
SOX2-201ENST00000325404 PYROXD2Q8N2H3 581 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms