RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ASB12Q8WXK4 309 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 SAR1AQ9NR31 198 aa8.91□□□□□ -0.98
USF3-201ENST00000316407 ADSSP30520 456 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 TTI2Q6NXR4 508 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 DNAJB14Q8TBM8 379 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ACTRT1Q8TDG2 376 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 CLPTM1LQ96KA5 538 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 IKZF3Q9UKT9 509 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 PIN4Q9Y237 131 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 CHRNGP07510 517 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 TGFBR2P37173 567 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 AP1S2P56377 157 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ARF3P61204 181 aaPredicted RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 ERVK-9P63128 1117 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ARF1P84077 181 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 SEZ6Q53EL9 994 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SYNPOQ8N3V7 929 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ZC3H10Q96K80 434 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 MED15Q96RN5 788 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SEPT5Q99719 369 aaPredicted RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 NOTOA8MTQ0 251 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 CAMTA2O94983 1202 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 PAICSP22234 425 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 CLIP4Q8N3C7 705 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 URGCPQ8TCY9 931 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SH3TC2Q8TF17 1288 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 PIH1D2Q8WWB5 315 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SIN3BO75182 1162 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 GRK4P32298 578 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 BORCS5Q969J3 196 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 UBE2Q2LH0YL09 131 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 PSMA3P25788 255 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 CBFBQ13951 182 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ZNF512Q96ME7 567 aaPredicted RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 MAPRE3Q9UPY8 281 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ZNF432O94892 652 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SPESP1Q6UW49 350 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SLC9A6Q92581 669 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 MTMR8Q96EF0 704 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 TEKT5Q96M29 485 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 ABCG8Q9H221 673 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 DSN1Q9H410 356 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 CDH9Q9ULB4 789 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 EYA4O95677 639 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 HLA-DQA2P01906 255 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 DEFA5Q01523 94 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.9□□□□□ -0.98
USF3-201ENST00000316407 MYLPFQ96A32 169 aa8.9□□□□□ -0.98
USF3-201ENST00000316407 TRNT1Q96Q11 434 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 PPIEQ9UNP9 301 aaKnown RBP8.9□□□□□ -0.98
USF3-201ENST00000316407 SPATA31E1Q6ZUB1 1445 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 TRMUO75648 421 aaKnown RBP8.9□□□□□ -0.99
USF3-201ENST00000316407 ERVK-10P10266 1014 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 NPR3P17342 541 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 POLNQ7Z5Q5 900 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 PRKCBP05771 671 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 GPR1P46091 355 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 NAPEPLDQ6IQ20 393 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 ING5Q8WYH8 240 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.99
USF3-201ENST00000316407 UGT2B28Q9BY64 529 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 A0A0G2JPF8 293 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 HNRNPCL3B7ZW38 293 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 HNRNPCL4P0DMR1 293 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 C18orf25Q96B23 403 aaPredicted RBP8.9□□□□□ -0.99
USF3-201ENST00000316407 TRIM62Q9BVG3 475 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 GPAMQ9HCL2 828 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.99
USF3-201ENST00000316407 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.9□□□□□ -0.99
USF3-201ENST00000316407 C2orf81A6NN90 581 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 SEC22BO75396 215 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 LPCAT4Q643R3 524 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 CRISPLD1Q9H336 500 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MED22Q15528 200 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 GCNT7Q6ZNI0 430 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MRPL48Q96GC5 212 aaKnown RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 TMLHEQ9NVH6 421 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 AP4B1Q9Y6B7 739 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TPP1O14773 563 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PRG2P13727 222 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 AP2S1P53680 142 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 AP5B1Q2VPB7 878 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 CAMK1DQ8IU85 385 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 UCMAQ8WVF2 138 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 NT5MQ9NPB1 228 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 SCUBE2Q9NQ36 999 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ERVK-7P63135 1459 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 TBX3O15119 743 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 C9P02748 559 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 CYP11B1P15538 503 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 MPP3Q13368 585 aa8.89□□□□□ -0.99
USF3-201ENST00000316407 ORC2Q13416 577 aaPredicted RBP8.89□□□□□ -0.99
USF3-201ENST00000316407 CBWD2Q8IUF1 395 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms