RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 EDN1P05305 212 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 MBL2P11226 248 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CCND1P24385 295 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 PTPN4P29074 926 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 PRKCZQ05513 592 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 PTRHD1Q6GMV3 140 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CARNMT1Q8N4J0 409 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 BRD8Q9H0E9 1235 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 IL1RAPL1Q9NZN1 696 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CASQ2O14958 399 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 ADRA1BP35368 520 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 FOXD4Q12950 439 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TUSC3Q13454 348 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 GRTP1Q5TC63 336 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 LRRC8EQ6NSJ5 796 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 VAT1Q99536 393 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 UPF3AQ9H1J1 476 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CDY1Q9Y6F8 540 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 KLHL2O95198 593 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CKMP06732 381 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 POLE2P56282 527 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 WDTC1Q8N5D0 677 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 UBXN6Q9BZV1 441 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CNGB3Q9NQW8 809 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 SYBUQ9NX95 663 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 UTP6Q9NYH9 597 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 SERPINB5P36952 375 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 GRIA1P42261 906 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 DAOAP59103 153 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 MAP7Q14244 749 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 MECRQ9BV79 373 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TMPRSS4Q9NRS4 437 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 NDE1Q9NXR1 346 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 GLI3P10071 1580 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TCRBV7S3A2A0A539 114 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 HOXA2O43364 376 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CD151P48509 253 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 SERPINB8P50452 374 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 MAXP61244 160 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CDCA2Q69YH5 1023 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 VPS28Q9UK41 221 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 H0Y626 953 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 NOL3O60936 208 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 DUSP11O75319 330 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CABYRO75952 493 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 SRP72O76094 671 aaKnown RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 OR1E1P30953 314 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CDK16Q00536 496 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 PCBP1Q15365 356 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 RBBP7Q16576 425 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TAPT1Q6NXT6 567 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 POU5F2Q8N7G0 328 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 PDZD8Q8NEN9 1154 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 C16orf70Q9BSU1 422 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TPP1O14773 563 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 METTL18O95568 372 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 BST1Q10588 318 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 TRIP10Q15642 601 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 DEFB115Q30KQ5 88 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 CERCAMQ5T4B2 595 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 IFNEQ86WN2 208 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 OXNAD1Q96HP4 312 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-201ENST00000314191 RMDN2Q96LZ7 410 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 UROC1Q96N76 676 aa6.33□□□□□ -1.4
PRKDC-201ENST00000314191 BCLAF3A2AJT9 711 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 TOMM70O94826 608 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 GRIK3Q13003 919 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 C16orf59Q7L2K0 433 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 OTOAQ7RTW8 1153 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 OSTM1Q86WC4 334 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 USP13Q92995 863 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 C5P01031 1676 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MAGEB16A2A368 324 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 STBD1O95210 358 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ANP32DO95626 131 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FAM228AQ86W67 206 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DQX1Q8TE96 717 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 YIPF3Q9GZM5 350 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 MORF4L1Q9UBU8 362 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 GRIN2DO15399 1336 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 NVLO15381 856 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FSBPO95073 299 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 HSPA8P11142 646 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 FGFR1P11362 822 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DCLRE1AQ6PJP8 1040 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 C15orf39Q6ZRI6 1047 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 KIRREL3Q8IZU9 778 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PPP1R2P1Q96PQ5 205 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 EFHD1Q9BUP0 239 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PHLPP1O60346 1717 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 RPLP2P05387 115 aaKnown RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 URODP06132 367 aa6.32□□□□□ -1.4
PRKDC-201ENST00000314191 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-201ENST00000314191 PACS1Q6VY07 963 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms