RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 AHI1Q8N157 1196 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM3-203ENST00000312970 ZNF557Q8N988 423 aaPredicted RBP8.47□□□□□ -1.05
TPM3-203ENST00000312970 OR2I1PQ8NGU4 316 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 EPS8L1Q8TE68 723 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 CYB5D2Q8WUJ1 264 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 NELFBQ8WX92 580 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 KAT5Q92993 513 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 DDX50Q9BQ39 737 aaKnown RBP8.47□□□□□ -1.05
TPM3-203ENST00000312970 ZSWIM1Q9BR11 485 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 MIR1-1HGQ9H1L0 117 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 PCED1AQ9H1Q7 454 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 TMEM245Q9H330 911 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 ABCB8Q9NUT2 735 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 SUN2Q9UH99 717 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 GGA2Q9UJY4 613 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
TPM3-203ENST00000312970 PCDH15Q96QU1 1955 aa8.46□□□□□ -1.05
TPM3-203ENST00000312970 BCAT2O15382 392 aaPredicted RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 SH3BP5O60239 455 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 GJB3O75712 270 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 RECKO95980 971 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 C7P10643 843 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 HLA-EP13747 358 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 BMP6P22004 513 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 ERCC5P28715 1186 aaPredicted RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 GPD2P43304 727 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 ACADSBP45954 432 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 RPL34P49207 117 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 FAM193AP78312 1265 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 ZBTB16Q05516 673 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 MORC3Q14149 939 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 TRIP6Q15654 476 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 PTPRNQ16849 979 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 ZNF423Q2M1K9 1284 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 IL27RAQ6UWB1 636 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 FAM124AQ86V42 546 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 ARHGEF19Q8IW93 802 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 FIBINQ8TAL6 211 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 CLEC4CQ8WTT0 213 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 SRRTQ9BXP5 876 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 MIS12Q9H081 205 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 FBRSQ9HAH7 460 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 PRSS16Q9NQE7 514 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 EIF2B4Q9UI10 523 aaKnown RBP8.46□□□□□ -1.06
TPM3-203ENST00000312970 CNTN6Q9UQ52 1028 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 NEUROG3Q9Y4Z2 214 aa8.46□□□□□ -1.06
TPM3-203ENST00000312970 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.46□□□□□ -1.06
TPM3-203ENST00000312970 CFAP46Q8IYW2 2715 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 TYW5A2RUC4 315 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 BIN1O00499 593 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 SART1O43290 800 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 MED7O43513 233 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 HYAL3O43820 417 aaPredicted RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 FGFR1OPO95684 399 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 CALCAP01258 141 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 DNTTP04053 509 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 FYNP06241 537 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 KRT5P13647 590 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 SLC6A4P31645 630 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 CD70P32970 193 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ACSL1P33121 698 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 SGSHP51688 502 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 STX17P56962 302 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ST8SIA6P61647 398 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 RPS14P62263 151 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 GRIK2Q13002 908 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 PAK1Q13153 545 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 FAM133BQ5BKY9 247 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 BEND5Q7L4P6 421 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 MFN1Q8IWA4 741 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 TRIM59Q8IWR1 403 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ZCCHC9Q8N567 271 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 ZNF366Q8N895 744 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 HJURPQ8NCD3 748 aaPredicted RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 C1orf216Q8TAB5 229 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ZNF606Q8WXB4 792 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ZCCHC14Q8WYQ9 949 aaKnown RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 TTC17Q96AE7 1141 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 KREMEN1Q96MU8 473 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 CAMK1GQ96NX5 476 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 SERPINB11Q96P15 392 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 TRIM62Q9BVG3 475 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 BTBD1Q9H0C5 482 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 LHX5Q9H2C1 402 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 GAREM1Q9H706 876 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 UBE2TQ9NPD8 197 aaPredicted RBP8.45□□□□□ -1.06
TPM3-203ENST00000312970 ST7Q9NRC1 585 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 STIM2Q9P246 746 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 CTNND2Q9UQB3 1225 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 NAALADL1Q9UQQ1 740 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms