RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TAF6LQ9Y6J9 622 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 LAMB4A4D0S4 1761 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 UNC13CQ8NB66 2214 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC72A6NJI9 287 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RARGP13631 454 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ITGA1P56199 1179 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 MAPK7Q13164 816 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 C10orf62Q5T681 223 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NBPF12Q5TAG4 269 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC38Q5VT99 294 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 AGMOQ6ZNB7 445 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GPR135Q8IZ08 494 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 STAG3L4Q8TBR4 150 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 EXT2Q93063 718 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 EBNA1BP2Q99848 306 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CHORDC1Q9UHD1 332 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 NOVA2Q9UNW9 492 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RGPD5Q99666 1765 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 C5orf60A6NFR6 353 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 XPO1O14980 1071 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PER2O15055 1255 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 RGS14O43566 566 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CLDN11O75508 207 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 THRAP10827 490 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 IGFBP4P22692 258 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 PSMD4P55036 377 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SESN2P58004 480 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ITGA7Q13683 1181 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC32Q14392 662 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 TIMM50Q3ZCQ8 353 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 TTI2Q6NXR4 508 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 KYAT3Q6YP21 454 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CDR2LQ86X02 465 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 FBXO16Q8IX29 292 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 BTN2A2Q8WVV5 523 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ACDQ96AP0 544 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 AGAP3Q96P47 875 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 CELF4Q9BZC1 486 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 EPN3Q9H201 632 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 INTS13Q9NVM9 706 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 GPN3Q9UHW5 284 aaPredicted RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 HBS1LQ9Y450 684 aaKnown RBP3.26□□□□□ -1.89
CLOCK-201ENST00000309964 SNCAIPQ9Y6H5 919 aa3.26□□□□□ -1.89
CLOCK-201ENST00000309964 ADGRA3Q8IWK6 1321 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SMIM31A0A1B0GVY4 71 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SLC12A8A0AV02 714 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ANKDD1BA6NHY2 528 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 APOC4-APOC2K7ER74 178 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TMCC2O75069 709 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CSPG5O95196 566 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 APOC2P02655 101 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 LTFP02788 710 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PRNPP04156 253 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SELPP16109 830 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SERPINB3P29508 390 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 NMT1P30419 496 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CHI3L1P36222 383 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SERPINB5P36952 375 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 GRSF1Q12849 480 aaKnown RBP eCLIP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ATXN7L2Q5T6C5 722 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TPGS2Q68CL5 300 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SEL1L3Q68CR1 1132 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MIB1Q86YT6 1006 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MAP4K3Q8IVH8 894 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC71Q8N4P6 559 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 BLOC1S5Q8TDH9 187 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HDAC7Q8WUI4 952 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 THOC1Q96FV9 657 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CSPG4P5Q96PW8 444 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 OSMRQ99650 979 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TTPALQ9BTX7 342 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 UGT2B28Q9BY64 529 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TLE6Q9H808 572 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 BRD9Q9H8M2 597 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RBM22Q9NW64 420 aaKnown RBP eCLIP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FNIP2Q9P278 1114 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TSPAN16Q9UKR8 245 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ARID1BQ8NFD5 2236 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SLC25A12O75746 678 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CHGBP05060 677 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 WEE2P0C1S8 567 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 AMD1P17707 334 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PTPRAP18433 802 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 NEK2P51955 445 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PDX1P52945 283 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CHRNB3Q05901 458 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 USP4Q13107 963 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TTC23Q5W5X9 447 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SV2AQ7L0J3 742 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 OTOP3Q7RTS5 596 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TOP6BLQ8N6T0 577 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 IPMKQ8NFU5 416 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 BRSK1Q8TDC3 778 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ASZ1Q8WWH4 475 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 JADE3Q92613 823 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 EME1Q96AY2 570 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CLMNQ96JQ2 1002 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TAAR1Q96RJ0 339 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FDXACB1Q9BRP7 624 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms