RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MGARPQ8TDB4 240 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 OMA1Q96E52 524 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 IFT43Q96FT9 208 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MS4A14Q96JA4 679 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SEPT5Q99719 369 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 GPR88Q9GZN0 384 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 INTS9Q9NV88 658 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SIX4Q9UIU6 781 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 DNMT3LQ9UJW3 386 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MAD1L1Q9Y6D9 718 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MYH11P35749 1972 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SYNJ2BP-COX16A0A087WUM0 186 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SOBPA7XYQ1 873 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF197O14709 1029 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 LIASO43766 372 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 POLBP06746 335 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 HOXA11P31270 313 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RECQLP46063 649 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 VEGFBP49765 207 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PPP2R2AP63151 447 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MRPS35P82673 323 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 OTUD4Q01804 1114 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 AP1B1Q10567 949 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SPARCL1Q14515 664 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SOWAHAQ2M3V2 549 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PARP6Q2NL67 630 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 BBS9Q3SYG4 887 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ANKRD20A8PQ5CZ79 823 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 C10orf120Q5SQS8 335 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF618Q5T7W0 954 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MAP3K21Q5TCX8 1036 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 KLC3Q6P597 504 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF449Q6P9G9 518 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 LONP2Q86WA8 852 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 CTAGE3PQ8IX95 158 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SAMD14Q8IZD0 417 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ARHGAP24Q8N264 748 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SKA1Q96BD8 255 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 HAPLN3Q96S86 360 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RBM15Q96T37 977 aaKnown RBP eCLIP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PPANQ9NQ55 473 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 TAS2R14Q9NYV8 317 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 COX16Q9P0S2 106 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 BACE2Q9Y5Z0 518 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 C9IYK1 514 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 M0QZQ0 153 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ABLIM1O14639 778 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 NOL3O60936 208 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 H2AFYO75367 372 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SERPINI2O75830 405 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 LATS1O95835 1130 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 HOXC8P31273 242 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 L1CAMP32004 1257 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 MAGEA4P43358 317 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PRKAA2P54646 552 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 YBEYP58557 167 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ADAM17P78536 824 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PDIA2Q13087 525 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PSMD5Q16401 504 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 CCDC153Q494R4 210 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 HABP4Q5JVS0 413 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 C10orf62Q5T681 223 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RNF219Q5W0B1 726 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 DUPD1Q68J44 220 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ALKAL1Q6UXT8 129 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PID1Q7Z2X4 250 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 RAB44Q7Z6P3 723 aaPredicted RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 DEPDC1BQ8WUY9 529 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 SLC35F5Q8WV83 523 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 TMEM109Q9BVC6 243 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 TSSK1BQ9BXA7 367 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ULBP1Q9BZM6 244 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
SEC22A-201ENST00000309934 EIF2B3Q9NR50 452 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 XPO7Q9UIA9 1087 aaKnown RBP6.16□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ATP5BP06576 529 aaKnown RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 RARAP10276 462 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 KRT20P35900 424 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ATP5C1P36542 298 aaKnown RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 POLD2P49005 469 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 MAPKAPK2P49137 400 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ITGA8P53708 1063 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ITKQ08881 620 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF177Q13360 481 aaPredicted RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 FOXR1Q6PIV2 292 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 LRRC8CQ8TDW0 803 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 ART4Q93070 314 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 BCAS3Q9H6U6 928 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 AFF4Q9UHB7 1163 aaKnown RBP6.15□□□□□ -1.42
SEC22A-201ENST00000309934 TMEM59LQ9UK28 342 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 TLK1Q9UKI8 766 aa6.15□□□□□ -1.42
SEC22A-201ENST00000309934 SDR42E2A6NKP2 422 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms