RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
APOBEC3F-201ENST00000308521 TIMM13Q9Y5L4 95 aaPredicted RBP10.62□□□□□ -0.71
APOBEC3F-201ENST00000308521 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CCDC162PA2VCL2 907 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 KPNA7A9QM74 516 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 POMCP01189 267 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 LYNP07948 512 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PIM1P11309 404 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PAX3P23760 479 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 SCNN1GP51170 649 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 GDF10P55107 478 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ACTR3P61158 418 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 AP2B1P63010 937 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 HPCAP84074 193 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 LPIN1Q14693 890 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 BBS9Q3SYG4 887 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 FBXO47Q5MNV8 452 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TMCO4Q5TGY1 634 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TTC7BQ86TV6 843 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 NT5DC4Q86YG4 428 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 SDR16C5Q8N3Y7 309 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 EMC1Q8N766 993 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TTC17Q96AE7 1141 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ACSF2Q96CM8 615 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 FAM161BQ96MY7 647 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 NT5C1AQ9BXI3 368 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PPP1R12CQ9BZL4 782 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 C1orf21Q9H246 121 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PTTG2Q9NZH5 202 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TAGLN3Q9UI15 199 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 XPO7Q9UIA9 1087 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TSPAN16Q9UKR8 245 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 INPP5FQ9Y2H2 1132 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 IKBKGQ9Y6K9 419 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 WASF2Q9Y6W5 498 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CASTOR2A6NHX0 329 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PIRO00625 290 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 FKBP6O75344 327 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TMEM63AO94886 807 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 INHBAP08476 426 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 KRT7P08729 469 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CDH5P33151 784 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CLCN2P51788 898 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 DSG1Q02413 1049 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ATG16L1Q676U5 607 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 AGMOQ6ZNB7 445 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 RAB3IL1Q8TBN0 382 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ADAM2Q99965 735 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ECSITQ9BQ95 431 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 MKS1Q9NXB0 559 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 FAM237BA0A1B0GVD1 139 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 A0A1W2PQ45 241 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 A0A1W2PQY0 241 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TCRBV7S3A2A0A539 114 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ARL5CA6NH57 179 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 SPECC1L-ADORA2AF8WAN1 911 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 I3L4J1 428 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 GRAP2O75791 330 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ERBB2P04626 1255 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ACAT1P24752 427 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CST5P28325 142 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 LILRA4P59901 499 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 NKX3-2P78367 333 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 HNRNPDQ14103 355 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 SLC44A4Q53GD3 710 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TTC39BQ5VTQ0 682 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 AAGABQ6PD74 315 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 MARK2Q7KZI7 788 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ST13P4Q8IZP2 240 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 JOSD2Q8TAC2 188 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PIWIL1Q96J94 861 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 WWP1Q9H0M0 922 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 NRDE2Q9H7Z3 1164 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CYP3A43Q9HB55 503 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 STARD7Q9NQZ5 370 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 ZNF180Q9UJW8 692 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 PCDHGC3Q9UN70 934 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 TEX264Q9Y6I9 313 aa10.61□□□□□ -0.71
APOBEC3F-201ENST00000308521 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 TCRBV9S1A1TA0A576 114 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 COPEO14579 308 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 GPR182O15218 404 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CST8O60676 142 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 HNRNPCP07910 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CCDC130P13994 396 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 RFC1P35251 1148 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 CLCNKBP51801 687 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 RABGGTBP53611 331 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 SLC25A11Q02978 314 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 HSF5Q4G112 596 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 RIPOR1Q6ZS17 1223 aa10.6□□□□□ -0.71
APOBEC3F-201ENST00000308521 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms