RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ABCB8Q9NUT2 735 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 KIAA1522Q9P206 1035 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 IP6K2Q9UHH9 426 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FBXO10Q9UK96 956 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NENFQ9UMX5 172 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CKAP5Q14008 2032 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EML5Q05BV3 1969 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHD5Q8TDI0 1954 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 A0A0A0MRY4 1105 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHURC1-FNTBB4DL54 471 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MYO1FO00160 1098 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SRGAP2O75044 1071 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CLDN11O75508 207 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 POLR2EP19388 210 aaKnown RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HLA-FP30511 346 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ADRA1BP35368 520 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CDH4P55283 916 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CSTF1Q05048 431 aaKnown RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SCAPQ12770 1279 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LMAN2Q12907 356 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GEN1Q17RS7 908 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RAB6CQ53S08 254 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCDC185Q8N715 623 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FIBINQ8TAL6 211 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EZH1Q92800 747 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 IGSF8Q969P0 613 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TBC1D31Q96DN5 1066 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MYEOVQ96EZ4 313 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PPP1R9BQ96SB3 815 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EPAS1Q99814 870 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 BAG1Q99933 345 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PACSIN1Q9BY11 444 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RAB6CQ9H0N0 254 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ANLNQ9NQW6 1124 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PRMT8Q9NR22 394 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CLEC4EQ9ULY5 219 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MMP17Q9ULZ9 603 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 STARD13Q9Y3M8 1113 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SNX10Q9Y5X0 201 aa11.34□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NPC1O15118 1278 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TIMM44O43615 452 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NRDCO43847 1150 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ATP5BP06576 529 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RHOCP08134 193 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 COL9A1P20849 921 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CD70P32970 193 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SSR1P43307 286 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KIR2DL1P43626 348 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NRLP54845 237 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SATB1Q01826 763 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZNF252P-AS1Q0IIN9 211 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SLC12A1Q13621 1099 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 GAS6Q14393 721 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DMC1Q14565 340 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RNF219Q5W0B1 726 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EGFLAMQ63HQ2 1017 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 MBLAC2Q68D91 279 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RNF43Q68DV7 783 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RWDD4Q6NW29 188 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SYT13Q7L8C5 426 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SFTPA1Q8IWL2 248 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CCDC33Q8N5R6 958 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TXNDC5Q8NBS9 432 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 WFDC5Q8TCV5 224 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ANP32BQ92688 251 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 P2RY11Q96G91 374 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TRIM7Q9C029 511 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ZYG11BQ9C0D3 744 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 OSBPL2Q9H1P3 480 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ELOVL2Q9NXB9 296 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PPARGC1AQ9UBK2 798 aaKnown RBP11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 OR12D3Q9UGF7 316 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 PCSK1NQ9UHG2 260 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FBXO4Q9UKT5 387 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FZD10Q9ULW2 581 aa11.33□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 EIF3CLB5ME19 914 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms