RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 HADHQ16836 314 aaKnown RBP23.05■■□□□ 1.28
HOXD4-201ENST00000306324 PREPLQ4J6C6 727 aaPredicted RBP23.05■■□□□ 1.28
HOXD4-201ENST00000306324 KCNT1Q5JUK3 1230 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 FAM72AQ5TYM5 149 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 FAM72DQ6L9T8 149 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 FSTL4Q6MZW2 842 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 CYP4V2Q6ZWL3 525 aaPredicted RBP23.05■■□□□ 1.28
HOXD4-201ENST00000306324 FAM72BQ86X60 149 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 ZNF683Q8IZ20 524 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 PJA1Q8NG27 643 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 ZNF830Q96NB3 372 aaPredicted RBP23.05■■□□□ 1.28
HOXD4-201ENST00000306324 FBXO10Q9UK96 956 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 SIT1Q9Y3P8 196 aa23.05■■□□□ 1.28
HOXD4-201ENST00000306324 A0A0U1RQJ8 604 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 A0A1B0GVM2 712 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 TCAF2A6NFQ2 919 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 H0Y626 953 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 CREB3O43889 395 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 LUC7L3O95232 432 aaKnown RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 EGFP01133 1207 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 DRD1P21728 446 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 MAN1A1P33908 653 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 GJC1P36383 396 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 CCDC173Q0VFZ6 552 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 CWF19L1Q69YN2 538 aaKnown RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 ASTLQ6HA08 431 aaPredicted RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 RWDD4Q6NW29 188 aaKnown RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 SUGP1Q8IWZ8 645 aaKnown RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 CCAR2Q8N163 923 aaKnown RBP23.04■■□□□ 1.28
HOXD4-201ENST00000306324 PHTF2Q8N3S3 785 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 WFDC5Q8TCV5 224 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 ATRIPQ8WXE1 791 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 HSPH1Q92598 858 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 SLC2A11Q9BYW1 496 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 MPP6Q9NZW5 540 aa23.04■■□□□ 1.28
HOXD4-201ENST00000306324 TBC1D3BA6NDS4 549 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 BTNL10A8MVZ5 291 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 BUB1BO60566 1050 aaPredicted RBP23.03■■□□□ 1.28
HOXD4-201ENST00000306324 CNTN5O94779 1100 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 LRIG2O94898 1065 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 CISD3P0C7P0 127 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 L1CAMP32004 1257 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 GRIA2P42262 883 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 NRG1Q02297 640 aaPredicted RBP23.03■■□□□ 1.28
HOXD4-201ENST00000306324 SLC25A11Q02978 314 aaKnown RBP23.03■■□□□ 1.28
HOXD4-201ENST00000306324 CA9Q16790 459 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 C5orf22Q49AR2 442 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 BOLA3Q53S33 107 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 ALFQ53S48 1182 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 TXNRD3NBQ6F5E7 133 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 TERB1Q8NA31 727 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 EPAS1Q99814 870 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 RBM12Q9NTZ6 932 aaKnown RBP23.03■■□□□ 1.28
HOXD4-201ENST00000306324 TRIM10Q9UDY6 481 aa23.03■■□□□ 1.28
HOXD4-201ENST00000306324 IGLV3-10A0A075B6K4 115 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 MACROD2A1Z1Q3 448 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 DRGXA6NNA5 263 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 NCAM2O15394 837 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 CCDC175P0C221 793 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 CCINQ13939 588 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 PPP6R3Q5H9R7 873 aaPredicted RBP23.02■■□□□ 1.28
HOXD4-201ENST00000306324 RNF43Q68DV7 783 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 NUDT18Q6ZVK8 323 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 PSTKQ8IV42 348 aaKnown RBP23.02■■□□□ 1.28
HOXD4-201ENST00000306324 SFTPA1Q8IWL2 248 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 CCDC105Q8IYK2 499 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 ZNF557Q8N988 423 aaPredicted RBP23.02■■□□□ 1.28
HOXD4-201ENST00000306324 TBC1D31Q96DN5 1066 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 ZYG11BQ9C0D3 744 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 LMAN1LQ9HAT1 526 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 C11orf16Q9NQ32 467 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 ABCB8Q9NUT2 735 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 PPARGC1AQ9UBK2 798 aaKnown RBP23.02■■□□□ 1.28
HOXD4-201ENST00000306324 HYOU1Q9Y4L1 999 aa23.02■■□□□ 1.28
HOXD4-201ENST00000306324 NUP205Q92621 2012 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.01■■□□□ 1.27
HOXD4-201ENST00000306324 CLDN11O75508 207 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 DCNP07585 359 aaKnown RBP23.01■■□□□ 1.27
HOXD4-201ENST00000306324 RARAP10276 462 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 CHRNB1P11230 501 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 HLA-FP30511 346 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 CDH4P55283 916 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 TAS2R40P59535 323 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 ZNF177Q13360 481 aaPredicted RBP23.01■■□□□ 1.27
HOXD4-201ENST00000306324 LRRC32Q14392 662 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 FSCBQ5H9T9 825 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 MANEALQ5VSG8 457 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 CHST9Q7L1S5 443 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 BMP8AQ7Z5Y6 402 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 ANKS1BQ7Z6G8 1248 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 TFAP2DQ7Z6R9 452 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 ZNF687Q8N1G0 1237 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 TPCN2Q8NHX9 752 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 FIBINQ8TAL6 211 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 EZH1Q92800 747 aaPredicted RBP23.01■■□□□ 1.27
HOXD4-201ENST00000306324 KCTD15Q96SI1 283 aaPredicted RBP23.01■■□□□ 1.27
HOXD4-201ENST00000306324 OSBPL6Q9BZF3 934 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 KCNF1Q9H3M0 494 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 GOLPH3Q9H4A6 298 aa23.01■■□□□ 1.27
HOXD4-201ENST00000306324 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms