RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 HTR3EA5X5Y0 456 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ZNF195O14628 629 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 CBFA2T3O75081 653 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ERVK-10P10266 1014 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 GARTP22102 1010 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PTPN7P35236 360 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TNFSF9P41273 254 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 RALGDSQ12967 914 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 DLG2Q15700 870 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 KCNT2Q6UVM3 1135 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 CHST15Q7LFX5 561 aaPredicted RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PLD6Q8N2A8 252 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 ISOC1Q96CN7 298 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 SIGLEC10Q96LC7 697 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 FERMT1Q9BQL6 677 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 CAB39LQ9H9S4 337 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 KANSL1LA0AUZ9 987 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 RGSL1A5PLK6 1076 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SAC3D1A6NKF1 404 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 K7ERI5 159 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 RGL2O15211 777 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ATE1O95260 518 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ATP5BP06576 529 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 SOX11P35716 441 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PHEXP78562 749 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 CTBSQ01459 385 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 FSTL1Q12841 308 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TRPC3Q13507 836 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SEPT6Q14141 434 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 ADRM1Q16186 407 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 C6orf183Q5T699 404 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 CHURC1Q8WUH1 139 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 PPP1R10Q96QC0 940 aaKnown RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 GLIS2Q9BZE0 524 aaPredicted RBP11.25□□□□□ -0.61
SNX20-201ENST00000300590 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNX20-201ENST00000300590 PNPLA8Q9NP80 782 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 SLC38A7Q9NVC3 462 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 EFR3BQ9Y2G0 817 aa11.25□□□□□ -0.61
SNX20-201ENST00000300590 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 GNAO1P09471 354 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 MCF2P10911 925 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ZNF26P17031 533 aaPredicted RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 UGT1A6P19224 532 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TFE3P19532 575 aaPredicted RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 CD247P20963 164 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 UGT1A1P22309 533 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 UGT1A4P22310 534 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 UGT1A3P35503 534 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 UGT1A5P35504 534 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ITGADQ13349 1161 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 LSM12Q3MHD2 195 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 FGD3Q5JSP0 725 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 BORAQ6PGQ7 559 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CDR2LQ86X02 465 aaPredicted RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 CENPSQ8N2Z9 138 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 PLEKHA8Q96JA3 519 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 AGAP3Q96P47 875 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 MAGEB5Q9BZ81 275 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 NAA50Q9GZZ1 169 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 OLAHQ9NV23 265 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TBCCD1Q9NVR7 557 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 HES2Q9Y543 173 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 AP4S1Q9Y587 144 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 FAM159BA6NKW6 160 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 SERPINB2P05120 415 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ACAT1P24752 427 aaKnown RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 GRK2P25098 689 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 SERPINB9P50453 376 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 IKBKEQ14164 716 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ZFP1Q6P2D0 407 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TTC33Q6PID6 262 aaPredicted RBP11.24□□□□□ -0.61
SNX20-201ENST00000300590 ZBTB49Q6ZSB9 765 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TICAM1Q8IUC6 712 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 RANBP9Q96S59 729 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 NACA2Q9H009 215 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 CDH19Q9H159 772 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 H3BNH8 94 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 TIPRLO75663 272 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 LTFP02788 710 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 ERBB2P04626 1255 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 GLRBP48167 497 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 HSPA13P48723 471 aa11.24□□□□□ -0.61
SNX20-201ENST00000300590 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms