RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TAF5Q15542 800 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FOXR1Q6PIV2 292 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CD302Q8IX05 232 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KYQ8NBH2 561 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HIC2Q96JB3 615 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SERHL2Q9H4I8 314 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GBA2Q9HCG7 927 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SERHLQ9NQF3 203 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A0A1B0GW55 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRIM24O15164 1050 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CLTBP09497 229 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L2P0CJ85 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L3P0CJ86 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L4P0CJ87 422 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L5P0CJ88 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L6P0CJ89 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4L7P0CJ90 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RPA3P35244 121 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 INAQ16352 499 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C15orf59Q2T9L4 293 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 VPS45Q9NRW7 570 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DUX4Q9UBX2 424 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HPSEQ9Y251 543 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IPPQ9Y573 584 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATA31A5Q5VU36 1347 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATA31A7Q8IWB4 1347 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A0A096LPK6 155 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PGAM1P18669 254 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SGCGQ13326 291 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NRF1Q16656 503 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CBWD6Q4V339 395 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF621Q6ZSS3 439 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MILR1Q7Z6M3 343 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC22A9Q8IVM8 553 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATA6LQ8N4H0 392 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CAMKK1Q8N5S9 505 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 UBASH3BQ8TF42 649 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TAS2R14Q9NYV8 317 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MKL2Q9ULH7 1088 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FCHO1O14526 889 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BFSP2Q13515 415 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CYP20A1Q6UW02 462 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IL27RAQ6UWB1 636 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RNF44Q7L0R7 432 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 USP7Q93009 1102 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PCDHB12Q9Y5F1 795 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SNTNA6NMZ2 147 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 E5RJQ4 531 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DCXO43602 365 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLITRK3O94933 977 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ADCYAP1R1P41586 468 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CACNA2D1P54289 1103 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PTENP60484 403 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GSTA3Q16772 222 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAM98BQ52LJ0 330 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MAP1SQ66K74 1059 aaPredicted RBP13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SNX32Q86XE0 403 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DHFR2Q86XF0 187 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCNJLQ8IV13 435 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KIAA1257Q9ULG3 409 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NDUFAF1Q9Y375 327 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAM220BPB1ANY3 271 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RBL1P28749 1068 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C4orf19Q8IY42 314 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PYDC1Q8WXC3 89 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF518BQ9C0D4 1074 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SYBUQ9NX95 663 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SATB2Q9UPW6 733 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SKIV2L2P42285 1042 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KCTD21Q4G0X4 260 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 WDR93Q6P2C0 686 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 METTL7BQ6UX53 244 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 OR6Y1Q8NGX8 325 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TMEM159Q96B96 161 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DGCR6LQ9BY27 220 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TK2O00142 265 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 EML1O00423 815 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LSM8O95777 96 aaKnown RBP13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SEC23AQ15436 765 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 VPS33AQ96AX1 596 aa13.83□□□□□ -0.19
CHRFAM7A-201ENST00000299847 OLFM1Q99784 485 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms