RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PIGHQ14442 188 aaPredicted RBP27.76■■■□□ 2.03
SSU72-201ENST00000291386 EIF4HQ15056 248 aaKnown RBP27.76■■■□□ 2.03
SSU72-201ENST00000291386 GEN1Q17RS7 908 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 LRRC31Q6UY01 552 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 CHST9Q7L1S5 443 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 CCDC117Q8IWD4 279 aaPredicted RBP27.76■■■□□ 2.03
SSU72-201ENST00000291386 NIPA2Q8N8Q9 360 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 WFDC5Q8TCV5 224 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 PPARGC1AQ9UBK2 798 aaKnown RBP27.76■■■□□ 2.03
SSU72-201ENST00000291386 IP6K2Q9UHH9 426 aa27.76■■■□□ 2.03
SSU72-201ENST00000291386 CACNA1IQ9P0X4 2223 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 EIF3CLB5ME19 914 aaKnown RBP27.75■■■□□ 2.03
SSU72-201ENST00000291386 E9PAM4 449 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 PCK1P35558 622 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 GGCXP38435 758 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 CCR3P51677 355 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 SCYL2Q6P3W7 929 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 PKN3Q6P5Z2 889 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 CCAR2Q8N163 923 aaKnown RBP27.75■■■□□ 2.03
SSU72-201ENST00000291386 CARNMT1Q8N4J0 409 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 RPLP0P6Q8NHW5 317 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 ZNF564Q8TBZ8 553 aaPredicted RBP27.75■■■□□ 2.03
SSU72-201ENST00000291386 ACDQ96AP0 544 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 EIF3CQ99613 913 aaKnown RBP27.75■■■□□ 2.03
SSU72-201ENST00000291386 PRMT8Q9NR22 394 aaPredicted RBP27.75■■■□□ 2.03
SSU72-201ENST00000291386 OR12D3Q9UGF7 316 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 LCMT1Q9UIC8 334 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 ANAPC7Q9UJX3 599 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 GGA2Q9UJY4 613 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 HCN2Q9UL51 889 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 FZD10Q9ULW2 581 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 SNX10Q9Y5X0 201 aa27.75■■■□□ 2.03
SSU72-201ENST00000291386 MYO18AQ92614 2054 aaKnown RBP27.74■■■□□ 2.03
SSU72-201ENST00000291386 TIMM44O43615 452 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 CLDN11O75508 207 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 PABPC1P11940 636 aaKnown RBP27.74■■■□□ 2.03
SSU72-201ENST00000291386 CDH4P55283 916 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 SEC13P55735 322 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 CDH18Q13634 790 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 TCEAL1Q15170 157 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 MANEALQ5VSG8 457 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 TMEM139Q8IV31 216 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 AHI1Q8N157 1196 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 RETREG1Q9H6L5 497 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 ABCB8Q9NUT2 735 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 KIAA1522Q9P206 1035 aaPredicted RBP27.74■■■□□ 2.03
SSU72-201ENST00000291386 CTTNBP2NLQ9P2B4 639 aa27.74■■■□□ 2.03
SSU72-201ENST00000291386 ANTXRLA6NF34 631 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 H0Y626 953 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 MYO1FO00160 1098 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 LAMTOR5O43504 91 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 LRCH4O75427 683 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 HNRNPLP14866 589 aaKnown RBP eCLIP27.73■■■□□ 2.03
SSU72-201ENST00000291386 CD70P32970 193 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 CXCL12P48061 93 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 GSDMDP57764 484 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 SLC12A1Q13621 1099 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 E2F5Q15329 346 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 C2orf27AQ580R0 203 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 EFHC2Q5JST6 749 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 EMC10Q5UCC4 262 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 SYT13Q7L8C5 426 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 MAML2Q8IZL2 1156 aaPredicted RBP27.73■■■□□ 2.03
SSU72-201ENST00000291386 BAG1Q99933 345 aaPredicted RBP27.73■■■□□ 2.03
SSU72-201ENST00000291386 FBXO4Q9UKT5 387 aa27.73■■■□□ 2.03
SSU72-201ENST00000291386 EPN1Q9Y6I3 576 aaPredicted RBP27.73■■■□□ 2.03
SSU72-201ENST00000291386 SOWAHDA6NJG2 315 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 NPC1O15118 1278 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 MTA2O94776 668 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 MIPP30301 263 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 L1CAMP32004 1257 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 IRAK1P51617 712 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 OXCT1P55809 520 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 LMAN2Q12907 356 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 DMC1Q14565 340 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 FSCBQ5H9T9 825 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 TMEM215Q68D42 235 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 TRMT11Q7Z4G4 463 aaKnown RBP27.72■■■□□ 2.03
SSU72-201ENST00000291386 ADIPOR2Q86V24 386 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 PSTKQ8IV42 348 aaKnown RBP27.72■■■□□ 2.03
SSU72-201ENST00000291386 RHOT2Q8IXI1 618 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 ZNF513Q8N8E2 541 aaPredicted RBP27.72■■■□□ 2.03
SSU72-201ENST00000291386 IL17RCQ8NAC3 791 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 UCMAQ8WVF2 138 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 ELOVL2Q9NXB9 296 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 TBC1D30Q9Y2I9 924 aa27.72■■■□□ 2.03
SSU72-201ENST00000291386 NDUFA10O95299 355 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 TIE1P35590 1138 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 MAGEA1P43355 309 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 ANGPT1Q15389 498 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 ALFQ53S48 1182 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 CIR1Q86X95 450 aaPredicted RBP27.71■■■□□ 2.03
SSU72-201ENST00000291386 ZYG11BQ9C0D3 744 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 MMP17Q9ULZ9 603 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 HCN4Q9Y3Q4 1203 aa27.71■■■□□ 2.03
SSU72-201ENST00000291386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.7■■■□□ 2.02
SSU72-201ENST00000291386 PRPSAP2O60256 369 aa27.7■■■□□ 2.02
SSU72-201ENST00000291386 SRGAP2O75044 1071 aa27.7■■■□□ 2.02
SSU72-201ENST00000291386 CNTN5O94779 1100 aa27.7■■■□□ 2.02
SSU72-201ENST00000291386 PLK1P53350 603 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms