RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 BSPRYQ5W0U4 402 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 PM20D1Q6GTS8 502 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SCYL2Q6P3W7 929 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 TMEM154Q6P9G4 183 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 DENND5BQ6ZUT9 1274 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CYP4V2Q6ZWL3 525 aaPredicted RBP10□□□□□ -0.81
LRTOMT-201ENST00000289488 SCD5Q86SK9 330 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 NUP93Q8N1F7 819 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 PRELID2Q8N945 189 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 ANKRD42Q8N9B4 389 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 FAM13CQ8NE31 585 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CFAP61Q8NHU2 1237 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 GDAP1Q8TB36 358 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SPPL2BQ8TCT7 592 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 FNIP1Q8TF40 1166 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 DNAJC9Q8WXX5 260 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 TRAPPC9Q96Q05 1148 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CNPY3Q9BT09 278 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 MYLK2Q9H1R3 596 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 POPDC2Q9HBU9 364 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 RPL26L1Q9UNX3 145 aaKnown RBP10□□□□□ -0.81
LRTOMT-201ENST00000289488 A0A0C4DFX4 3053 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 A0A1W2PQH9 124 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CAPN9O14815 690 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 TGM5O43548 720 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 TBX18O95935 607 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 LTFP02788 710 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CD48P09326 243 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 STX2P32856 288 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 MATKP42679 507 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SLC1A1P43005 524 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 MAGEA11P43364 429 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SNX16P57768 344 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 LAMB3Q13751 1172 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SETDB1Q15047 1291 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 EFHC1Q5JVL4 640 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 WASHC2DQ5SRD0 308 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 IRGCQ6NXR0 463 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 TTC27Q6P3X3 843 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 NIPA2Q8N8Q9 360 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 IFT43Q96FT9 208 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 C8orf48Q96LL4 319 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 NUDCD1Q96RS6 583 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 GORASP1Q9BQQ3 440 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 C11orf84Q9BUA3 381 aaPredicted RBP10□□□□□ -0.81
LRTOMT-201ENST00000289488 TRIM4Q9C037 500 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 CDC42EP4Q9H3Q1 356 aaKnown RBP10□□□□□ -0.81
LRTOMT-201ENST00000289488 PIDD1Q9HB75 910 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 PNPLA8Q9NP80 782 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 KCNK9Q9NPC2 374 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10□□□□□ -0.81
LRTOMT-201ENST00000289488 GPATCH2LQ9NWQ4 482 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10□□□□□ -0.81
LRTOMT-201ENST00000289488 USP18Q9UMW8 372 aa10□□□□□ -0.81
LRTOMT-201ENST00000289488 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 PRRG1O14668 218 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 PER2O15055 1255 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 RNF8O76064 485 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 LMNAP02545 664 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 GM2AP17900 193 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 PTDSS1P48651 473 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 TAF10Q12962 218 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 RAB33AQ14088 237 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 CCDC137Q6PK04 289 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 ARHGEF18Q6ZSZ5 1173 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 RBM23Q86U06 439 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 FAM131BQ86XD5 332 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 ZDHHC14Q8IZN3 488 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 UBL4BQ8N7F7 174 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 SLC7A14Q8TBB6 771 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 HSPH1Q92598 858 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 FAM136AQ96C01 138 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 DDX23Q9BUQ8 820 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 HEMGNQ9BXL5 484 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 MLXIPLQ9NP71 852 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 ANLNQ9NQW6 1124 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 TLR9Q9NR96 1032 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 PIGVQ9NUD9 493 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 IRAK4Q9NWZ3 460 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 GMIPQ9P107 970 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 AFF4Q9UHB7 1163 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 NUP205Q92621 2012 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 ANAPC1Q9H1A4 1944 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 C2orf71A6NGG8 1288 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 EPOPA6NHQ4 379 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 MIF4GDA9UHW6 222 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 I6L893 689 aaPredicted RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 M0QYT0 321 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 RFXAPO00287 272 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 HGSO14964 777 aaPredicted RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 MSI1O43347 362 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 FBXO21O94952 628 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 BRAFP15056 766 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 MAN1A1P33908 653 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 SULT1E1P49888 294 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 YWHAGP61981 247 aaKnown RBP eCLIP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 MUM1Q2TAK8 710 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 SLC25A52Q3SY17 297 aa9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 ZC3H12AQ5D1E8 599 aaKnown RBP9.99□□□□□ -0.81
LRTOMT-201ENST00000289488 VSIG1Q86XK7 387 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms