RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TNK2Q07912 1038 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 PCSK9Q8NBP7 692 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 MCRS1Q96EZ8 462 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 RTKNQ9BST9 563 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 GBA2Q9HCG7 927 aaPredicted RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ARMCX1Q9P291 453 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 AP4B1Q9Y6B7 739 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 SUPT7LO94864 414 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 TPBGLP0DKB5 382 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 PPIL2Q13356 520 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 GOLGA7BQ2TAP0 167 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ATP6AP1LQ52LC2 224 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 AARS2Q5JTZ9 985 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ZDHHC17Q8IUH5 632 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 OSBPL7Q9BZF2 842 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 SARS2Q9NP81 518 aaKnown RBP17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 USP18Q9UMW8 372 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ITGB3P05106 788 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 ITGAVP06756 1048 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 PSMB9P28065 219 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 SQLEQ14534 574 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 KCTD21Q4G0X4 260 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 SNX31Q8N9S9 440 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 PLEKHG4BQ96PX9 1271 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
PCDHA13-201ENST00000289272 MEI4A8MW99 385 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 HMGB3O15347 200 aaKnown RBP17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 FAM20BO75063 409 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 PDGFRBP09619 1106 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 FAAP100Q0VG06 881 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 SEZ6Q53EL9 994 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 TNFRSF25Q93038 417 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 MTMR12Q9C0I1 747 aa17.89■□□□□ 0.46
PCDHA13-201ENST00000289272 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 RCCD1A6NED2 376 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 EML1O00423 815 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 NR5A2O00482 541 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 MFN2O95140 757 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 RRM2P31350 389 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 TALDO1P37837 337 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 ZNF135P52742 658 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 NEDD8Q15843 81 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 IKBIPQ70UQ0 350 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 PRELID2Q8N945 189 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 HAS1Q92839 578 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 TAF4O00268 1085 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 IDH3BO43837 385 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 PEX1O43933 1283 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 ATP6V1B2P21281 511 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 KBTBD8Q8NFY9 601 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 OR7A2PQ8NGA2 310 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 CCNB1IP1Q9NPC3 277 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 MBD2Q9UBB5 411 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 BTBD3Q9Y2F9 522 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 ARIH1Q9Y4X5 557 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 TRMUO75648 421 aaKnown RBP17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 F9P00740 461 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 TAL1P17542 331 aaPredicted RBP17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 GLRA4Q5JXX5 417 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 HDDC2Q7Z4H3 204 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 ANAPC2Q9UJX6 822 aa17.89■□□□□ 0.45
PCDHA13-201ENST00000289272 MRC1P22897 1456 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 A0A087X1B8 175 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 DNM1LO00429 736 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 TRAFD1O14545 582 aaPredicted RBP17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 CDC25CP30307 473 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 CCT8P50990 548 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 IL5RAQ01344 420 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 MTM1Q13496 603 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 TRIQKQ629K1 86 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 WDR49Q8IV35 697 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 ALLCQ8N6M5 410 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 MKL1Q969V6 931 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 TCF12Q99081 682 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 COLEC11Q9BWP8 271 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 ALOX15BO15296 676 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 CTSHP09668 335 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 RFX4Q33E94 735 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 PQLC1Q8N2U9 271 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 LEMD2Q8NC56 503 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 ACTRT2Q8TDY3 377 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 OSBPL6Q9BZF3 934 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 RAB25P57735 213 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 PGM5Q15124 567 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 CLNKQ7Z7G1 428 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 ZDHHC13Q8IUH4 622 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 MIER2Q8N344 545 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 GLIS3Q8NEA6 775 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 SPIRE2Q8WWL2 714 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 USP13Q92995 863 aaPredicted RBP17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 SLC2A3P11169 496 aa17.88■□□□□ 0.45
PCDHA13-201ENST00000289272 ODC1P11926 461 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms