RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PACSIN2Q9UNF0 486 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 NOTCH4Q99466 2003 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 IGLV3-10A0A075B6K4 115 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TJP3O95049 919 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TCF4P15884 667 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 MARCKSL1P49006 195 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 EFEMP1Q12805 493 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 KLF1Q13351 362 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC12A1Q13621 1099 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CYP1B1Q16678 543 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TTC13Q8NBP0 860 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 SMG7Q92540 1137 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 RIPOR3Q96MK2 946 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 NECTIN4Q96NY8 510 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 EPAS1Q99814 870 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 MTMR10Q9NXD2 777 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 GDE1Q9NZC3 331 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TNRC18O15417 2968 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CCDC188H7C350 402 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 DPYSQ14117 519 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TFDP2Q14188 446 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ANKRD20A8PQ5CZ79 823 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 RNF43Q68DV7 783 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 DRICH1Q6PGQ1 229 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 HTR3DQ70Z44 454 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC13A5Q86YT5 568 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CPXM2Q8N436 756 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 RUBCNQ92622 972 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ATP6V1E2Q96A05 226 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 PRMT1Q99873 361 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 TKTL2Q9H0I9 626 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ANAPC5Q9UJX4 755 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 NEU3Q9UQ49 428 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 PER2O15055 1255 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 GMNNO75496 209 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 PYGMP11217 842 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ARL4AP40617 200 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 MTHFRP42898 656 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 NR2C2P49116 596 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 HARS2P49590 506 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 SMAD1Q15797 465 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CPNE8Q86YQ8 564 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CMTM8Q8IZV2 173 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ATXN3LQ9H3M9 355 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF148Q9UQR1 794 aa8.69□□□□□ -1.02
PTPDC1-201ENST00000288976 CXorf51AA0A1B0GTR3 108 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 DRGXA6NNA5 263 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RFPL2O75678 378 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC11A2P49281 568 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 PITX1P78337 314 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SEPT6Q14141 434 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RPS6KA2Q15349 733 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 BBS12Q6ZW61 710 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CHST9Q7L1S5 443 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RBM23Q86U06 439 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CACUL1Q86Y37 369 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF683Q8IZ20 524 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 HSPH1Q92598 858 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 OTUB2Q96DC9 234 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 ERLEC1Q96DZ1 483 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 BRD8Q9H0E9 1235 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 LSM7Q9UK45 103 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC12A8A0AV02 714 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 E2F8A0AVK6 867 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 C2orf78A6NCI8 922 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 MBL2P11226 248 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 MYL4P12829 197 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 TPD52P55327 224 aaPredicted RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 GRIN2CQ14957 1233 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 FAM131BQ86XD5 332 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 COG1Q8WTW3 980 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 GDAP1L1Q96MZ0 367 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SMC6Q96SB8 1091 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 VPS37BQ9H9H4 285 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 GREM1O60565 184 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 PAGE1O75459 146 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 KRT15P19012 456 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CCR2P41597 374 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CDH6P55285 790 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RFX8Q6ZV50 586 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RAPGEF5Q92565 580 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 FATE1Q969F0 183 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 RNF157Q96PX1 679 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 OSBPL8Q9BZF1 889 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 PRDM12Q9H4Q4 367 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CATSPERBQ9H7T0 1116 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CLEC1BQ9P126 229 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 PCSK1NQ9UHG2 260 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 LRRD1A4D1F6 860 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 EEF2KO00418 725 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 GFRA2O00451 464 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 APOL1O14791 398 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 ACSL4O60488 711 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 STC2O76061 302 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms