RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 MYO19Q96H55 970 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 VCPIP1Q96JH7 1222 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 BTN2A3PQ96KV6 586 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 C1orf74Q96LT6 269 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 XPO4Q9C0E2 1151 aaKnown RBP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 SEMA4AQ9H3S1 761 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 HAUS4Q9H6D7 363 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 DNAJC17Q9NVM6 304 aaKnown RBP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 PCDHGA2Q9Y5H1 932 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 OR51B4Q9Y5P0 310 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 R4GN57 208 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 SPAG17Q6Q759 2223 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 CKAP5Q14008 2032 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 SPTBN4Q9H254 2564 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 MUC22E2RYF6 1773 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-201ENST00000288344 SIGLEC16A6NMB1 481 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 C10orf142B7Z368 130 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 GJB6O95452 261 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 SERPINC1P01008 464 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 PTPN9P43378 593 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 DGKGP49619 791 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 IRAK1P51617 712 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 HDAC4P56524 1084 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 SNX16P57768 344 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 RPS24P62847 133 aaKnown RBP9.49□□□□□ -0.89
HMGN1-201ENST00000288344 ZBED6P86452 979 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 CDK17Q00537 523 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 OGDHQ02218 1023 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 TBX2Q13207 712 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-201ENST00000288344 DMC1Q14565 340 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 C2orf27AQ580R0 203 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 PLEKHA7Q6IQ23 1121 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 FBXL22Q6P050 247 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 SARM1Q6SZW1 724 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 C14orf80Q86SX3 495 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 MCOLN2Q8IZK6 566 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 ALLCQ8N6M5 410 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 C3orf20Q8ND61 904 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 OR52K2Q8NGK3 314 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 IGSF8Q969P0 613 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 EXOC4Q96A65 974 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 TTC17Q96AE7 1141 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
HMGN1-201ENST00000288344 TBCBQ99426 244 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 NUP58Q9BVL2 599 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 MAGEB5Q9BZ81 275 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 EPC1Q9H2F5 836 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 TMEM245Q9H330 911 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 TSPY26PQ9H489 355 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 DDIT4Q9NX09 232 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 ELOVL2Q9NXB9 296 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 THAP10Q9P2Z0 257 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-201ENST00000288344 NEU3Q9UQ49 428 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 CEP83Q9Y592 693 aa9.49□□□□□ -0.89
HMGN1-201ENST00000288344 PLXND1Q9Y4D7 1925 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TBC1D3BA6NDS4 549 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 PRR23AA6NEV1 266 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 WASH3PC4AMC7 463 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 M0QYT0 321 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CAPN9O14815 690 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TIMM44O43615 452 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TSPAN3O60637 253 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 PAGE1O75459 146 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 F9P00740 461 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 SKILP12757 684 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TACR2P21452 398 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CCR1P32246 355 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CD70P32970 193 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 SOX11P35716 441 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 SLC11A2P49281 568 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 FNTBP49356 437 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 PLK1P53350 603 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 RPL7AP62424 266 aaKnown RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 ARID5AQ03989 594 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 AUHQ13825 339 aaKnown RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 BRMS1LQ5PSV4 323 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 MANEALQ5VSG8 457 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 GRAMD4Q6IC98 578 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CXorf57Q6NSI4 855 aaKnown RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 LONP2Q86WA8 852 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CCDC33Q8N5R6 958 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 EMC1Q8N766 993 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 TXNDC5Q8NBS9 432 aaKnown RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 IPO4Q8TEX9 1081 aaKnown RBP9.48□□□□□ -0.89
HMGN1-201ENST00000288344 DDI1Q8WTU0 396 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 RXFP2Q8WXD0 754 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 GOLGA1Q92805 767 aa9.48□□□□□ -0.89
HMGN1-201ENST00000288344 BHMTQ93088 406 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms