RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 ZCCHC23Q6ZST2 131 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 METTL3Q86U44 580 aaKnown RBP3.82□□□□□ -1.8
RAB3C-201ENST00000282878 CCNYQ8ND76 341 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 CCDC26Q8TAB7 109 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 CDKL2Q92772 493 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 AZIN2Q96A70 460 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 TBCBQ99426 244 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 SIK2Q9H0K1 926 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 MAD1L1Q9Y6D9 718 aa3.82□□□□□ -1.8
RAB3C-201ENST00000282878 OGTO15294 1046 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MAP3K13O43283 966 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CLASP2O75122 1294 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PHF2O75151 1096 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 DAB1O75553 588 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CYP1A1P04798 512 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 RBL1P28749 1068 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PGFP49763 221 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SESN2P58004 480 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CSNK2BP67870 215 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 DUPD1Q68J44 220 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TMC3Q7Z5M5 1100 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 IFNL1Q8IU54 200 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SLC17A8Q8NDX2 589 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 DENND6BQ8NEG7 585 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 FEZF2Q8TBJ5 459 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PDCD6IPQ8WUM4 868 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SEC14L1Q92503 715 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 LRRC39Q96DD0 335 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 VCXQ9H320 206 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ZDHHC18Q9NUE0 388 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 DPP3Q9NY33 737 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PKD2L2Q9NZM6 624 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MARCOQ9UEW3 520 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CPSF3Q9UKF6 684 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TSPAN16Q9UKR8 245 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CACNA1FO60840 1977 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TNPO2O14787 897 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PFDN6O15212 129 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PIP5K1CO60331 668 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TMEM63AO94886 807 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SMIM10L2AP0DMW4 78 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SMIM10L2BP0DMW5 78 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 UNGP13051 313 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 KRT15P19012 456 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TKTP29401 623 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ARHGAP18Q8N392 663 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SLC4A11Q8NBS3 891 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MS4A4AQ96JQ5 239 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MRPL4Q9BYD3 311 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 GBA2Q9HCG7 927 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 FIS1Q9Y3D6 152 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TRDMT1O14717 391 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ENDOD1O94919 500 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CYP1A2P05177 515 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SRGAP2BP0DMP2 458 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CDH6P55285 790 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 AUHQ13825 339 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 BOLA3Q53S33 107 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SYPL2Q5VXT5 272 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TMEM154Q6P9G4 183 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 UBL4BQ8N7F7 174 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CNTD1Q8N815 330 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TUBGCP3Q96CW5 907 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ANKRD36BP1Q96IX9 119 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 HIC2Q96JB3 615 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PBKQ96KB5 322 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MNTQ99583 582 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SERHL2Q9H4I8 314 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SLCO1B3Q9NPD5 702 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CCDC177Q9NQR7 707 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CNGB3Q9NQW8 809 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 AK5Q9Y6K8 562 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 FAM221BA6H8Z2 402 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 GLTPD2A6NH11 291 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 RASGRF2O14827 1237 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 RGS16O15492 202 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TOM1L1O75674 476 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 LMNAP02545 664 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ITGB1P05556 798 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 C4BP0C0L5 1744 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ESRRAP11474 423 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TMEM11P17152 192 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MIPP30301 263 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 GBP1P32455 592 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 RPL22P35268 128 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MDH1P40925 334 aaKnown RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 TTLL4Q14679 1199 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 LIN9Q5TKA1 542 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 KIAA0319Q5VV43 1072 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 PMF1Q6P1K2 205 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 IQCKQ8N0W5 287 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 SYN2Q92777 582 aaPredicted RBP3.81□□□□□ -1.8
RAB3C-201ENST00000282878 CRB3Q9BUF7 120 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 RASSF1Q9NS23 344 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 FGFR1OP2Q9NVK5 253 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 ZNF358Q9NW07 568 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 BCAP29Q9UHQ4 241 aa3.81□□□□□ -1.8
RAB3C-201ENST00000282878 MED16Q9Y2X0 877 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms