RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RINLQ6ZS11 566 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 MARK2Q7KZI7 788 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 DEFB123Q8N688 67 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 MICAL1Q8TDZ2 1067 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 CDKL2Q92772 493 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 TAGLN3Q9UI15 199 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 H0Y3Z8 333 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 TSPAN1O60635 241 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 METTL18O95568 372 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 FGBP02675 491 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 CSH1P0DML2 217 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 CSH2P0DML3 217 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 SELPP16109 830 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 ACADSBP45954 432 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 RABGGTBP53611 331 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 KLC1Q07866 573 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 STX3Q13277 289 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 BFSP2Q13515 415 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 RCN1Q15293 331 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 CA9Q16790 459 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 RAB6CQ53S08 254 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 C6orf163Q5TEZ5 329 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 SNX30Q5VWJ9 437 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 HEATR6Q6AI08 1181 aaKnown RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 ANO7Q6IWH7 933 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 NET1Q7Z628 596 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 ARID3BQ8IVW6 561 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-201ENST00000277198 KIRREL3Q8IZU9 778 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 C12orf29Q8N999 325 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 PPFIBP2Q8ND30 876 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 STKLD1Q8NE28 680 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 OSBPL1AQ9BXW6 950 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 RAB6CQ9H0N0 254 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 MAD1L1Q9Y6D9 718 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 A0A0C4DFX4 3053 aa13.28□□□□□ -0.28
C9orf3-201ENST00000277198 HMX2A2RU54 273 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 B2RBV5 119 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 SPECC1L-ADORA2AF8WAN1 911 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 RGS7P49802 495 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 GRIK4Q16099 956 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 INSCQ1MX18 579 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 PPP6R3Q5H9R7 873 aaPredicted RBP13.27□□□□□ -0.28
C9orf3-201ENST00000277198 IRGCQ6NXR0 463 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 STRADAQ7RTN6 431 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.28
C9orf3-201ENST00000277198 SCUBE3Q8IX30 993 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 CPB2Q96IY4 423 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.28
C9orf3-201ENST00000277198 ARHGEF4Q9NR80 690 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 GPATCH2LQ9NWQ4 482 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 NMRK1Q9NWW6 199 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 DCDC2Q9UHG0 476 aa13.27□□□□□ -0.28
C9orf3-201ENST00000277198 HBS1LQ9Y450 684 aaKnown RBP13.27□□□□□ -0.28
C9orf3-201ENST00000277198 A0A0A0MRY4 1105 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 ZBBXA8MT70 800 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 GLRA3O75311 464 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 TM7SF2O76062 418 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 MYL4P12829 197 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 MYOGP15173 224 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 AOC1P19801 751 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 PAX7P23759 505 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 CDC42EP1Q00587 391 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 AP1B1Q10567 949 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 BST2Q10589 180 aaKnown RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 SYCP2LQ5T4T6 812 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 FAXCQ5TGI0 409 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 TTC7BQ86TV6 843 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 ALYREFQ86V81 257 aaKnown RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 ANKRD52Q8NB46 1076 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 DEPDC1BQ8WUY9 529 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 TFB1MQ8WVM0 346 aaKnown RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 HTR3CQ8WXA8 447 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 FAM136AQ96C01 138 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 HSFY1Q96LI6 401 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 SPATA13Q96N96 652 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 OLFM3Q96PB7 478 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 CSPG4P5Q96PW8 444 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC106Q9BWC9 280 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms