RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ASIC4Q96FT7 647 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 SPATA13Q96N96 652 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TSC22D3Q99576 134 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 FZD8Q9H461 694 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 PPEF2O14830 753 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 SNAI1O95863 264 aaPredicted RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 EEF1B2P24534 225 aaKnown RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 CA9Q16790 459 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TAF2Q6P1X5 1199 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 CMC1Q7Z7K0 106 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 ZDHHC17Q8IUH5 632 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 C7orf61Q8IZ16 206 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 OXNAD1Q96HP4 312 aaPredicted RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TBC1D10AQ9BXI6 508 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 ZCWPW1Q9H0M4 648 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 ZC3H4Q9UPT8 1303 aaKnown RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 ACOT9Q9Y305 439 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 CCDC88AQ3V6T2 1871 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 COL4A1P02462 1669 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 ASPAP45381 313 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 NR2C2P49116 596 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 TLE2Q04725 743 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 RNASEH2BQ5TBB1 312 aaKnown RBP14.68□□□□□ -0.06
TMEM47-201ENST00000275954 FAM171A1Q5VUB5 890 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 C9orf57Q5W0N0 161 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 MFSD5Q6N075 450 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 UNC5AQ6ZN44 842 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 PPTC7Q8NI37 304 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 SMPD4Q9NXE4 827 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 MYH1P12882 1939 aa14.68□□□□□ -0.06
TMEM47-201ENST00000275954 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 A8MUI8 341 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TPP1O14773 563 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CHADO15335 359 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 DCXO43602 365 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 PDE5AO76074 875 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TMEM63AO94886 807 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 FBXO21O94952 628 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ABHD2P08910 425 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ZCCHC18P0CG32 403 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 STMN1P16949 149 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CALB2P22676 271 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SLC1A6P48664 564 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 NDUFV1P49821 464 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 BFSP2Q13515 415 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 NOMO1Q15155 1222 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CYP1B1Q16678 543 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TMEM154Q6P9G4 183 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 KCNMB4Q86W47 210 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ULK4Q96C45 1275 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 HSFY1Q96LI6 401 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ADGRA2Q96PE1 1338 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TCRBV7S3A2A0A539 114 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 NCF1BA6NI72 391 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 NCF1CA8MVU1 366 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TIMM44O43615 452 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 HSPA8P11142 646 aaKnown RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 NCF1P14598 390 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 PTPN7P35236 360 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CYTH1Q15438 398 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CCNJLQ8IV13 435 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SCUBE1Q8IWY4 988 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 TRIML2Q8N7C3 387 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 DBF4BQ8NFT6 615 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 P2RY11Q96G91 374 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 MAN1C1Q9NR34 630 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 UTP6Q9NYH9 597 aaKnown RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 BAG5Q9UL15 447 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SEPT4O43236 478 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 UNC5CO95185 931 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 C22orf31O95567 290 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 CCR1P32246 355 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SERPINB8P50452 374 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SNX17Q15036 470 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 MAPRE1Q15691 268 aaKnown RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ANKRD20A4Q4UJ75 823 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ZNF470Q6ECI4 717 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ISLR2Q6UXK2 745 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 LINC00523Q86TU6 105 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 SPATA6LQ8N4H0 392 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 EFCAB3Q8N7B9 438 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 C12orf50Q8NA57 414 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ZBED3Q96IU2 234 aaPredicted RBP14.67□□□□□ -0.06
TMEM47-201ENST00000275954 PCYT2Q99447 389 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 PTPRHQ9HD43 1115 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 V9GYQ6 96 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 UBR2Q8IWV8 1755 aa14.67□□□□□ -0.06
TMEM47-201ENST00000275954 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 DARSP14868 501 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 MAP7Q14244 749 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SEPT8Q92599 483 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SMARCD1Q96GM5 515 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 EBNA1BP2Q99848 306 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 COL22A1Q8NFW1 1626 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms