RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 OSBPL11Q9BXB4 747 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CAPN10Q9HC96 672 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PRDM8Q9NQV8 689 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CLN6Q9NWW5 311 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CCDC59Q9P031 241 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PRR12Q9ULL5 1215 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 HPSEQ9Y251 543 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 A0A096LPK6 155 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PECAM1P16284 738 aaPredicted RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 RFX3P48380 749 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 NR2C2P49116 596 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 FBXO42Q6P3S6 717 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ATG9AQ7Z3C6 839 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CKAP2Q8WWK9 683 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 RAPGEFL1Q9UHV5 662 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CCNT2O60583 730 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 FARP2O94887 1054 aaPredicted RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 NPTXRO95502 500 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF24P17028 368 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 S100A3P33764 101 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 STARP49675 285 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 SMIM11AP58511 58 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 EFCAB12Q6NXP0 572 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 WDR49Q8IV35 697 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CCDC185Q8N715 623 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 NACC2Q96BF6 587 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TARS2Q9BW92 718 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 SYNDIG1Q9H7V2 258 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 C8orf4Q9NR00 106 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 DSEQ9UL01 958 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TRIM38O00635 465 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 KCNH1O95259 989 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PARNO95453 639 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CBX6O95503 412 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PTPAQ15257 358 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF571Q7Z3V5 609 aaPredicted RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 KBTBD2Q8IY47 623 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TNPO3Q9Y5L0 923 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 SEC22BO75396 215 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 EPN2O95208 641 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 MMP10P09238 476 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF7P17097 686 aaPredicted RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 RRM1P23921 792 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PTPN3P26045 913 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 NAMPTP43490 491 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CYP2R1Q6VVX0 501 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 AKAP14Q86UN6 197 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ZCCHC9Q8N567 271 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ACTL9Q8TC94 416 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ZHX1-C8orf76Q96EF9 292 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 QRFPRQ96P65 431 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 JMJD4Q9H9V9 463 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 GALNT8Q9NY28 637 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TAS2R13Q9NYV9 303 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 OR6B1O95007 311 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 PROCP04070 461 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ITGA2P17301 1181 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CYP2F1P24903 491 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 RHOAP61586 193 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ARHGEF5Q12774 1597 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 RUNDC3AQ59EK9 446 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 LZTR1Q8N653 840 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CDK5RAP1Q96SZ6 601 aaKnown RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 VAT1Q99536 393 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 ADAM28Q9UKQ2 775 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 CORO2BQ9UQ03 480 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 DAGLAQ9Y4D2 1042 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 JCHAINP01591 159 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 LRPAP1P30533 357 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 GPR15P49685 360 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ERVK-9P63128 1117 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MPZL3Q6UWV2 235 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 COLEC11Q9BWP8 271 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PHF11Q9UIL8 331 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 INVSQ9Y283 1065 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PSMD12O00232 456 aaPredicted RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 C21orf2O43822 256 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MAPTP10636 758 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 EIF3MQ7L2H7 374 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 AGAP11Q8TF27 550 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 USP7Q93009 1102 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 HAVCR1Q96D42 359 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 TPD52L3Q96J77 140 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 LRRC4BQ9NT99 713 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 GGA3Q9NZ52 723 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ARHGAP20Q9P2F6 1191 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 MTF2Q9Y483 593 aaPredicted RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 EFCAB6Q5THR3 1501 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 ERI2A8K979 691 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 SNX3O60493 162 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 GUCY1B2O75343 617 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 LTKP29376 864 aa8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 RPL21P46778 160 aaKnown RBP8.87□□□□□ -0.99
SCUBE3-201ENST00000274938 HMGCS2P54868 508 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms