RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 C7orf31Q8N865 590 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 RIN3Q8TB24 985 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 C20orf27Q9GZN8 174 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 TIMMDC1Q9NPL8 285 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 PCSK1NQ9UHG2 260 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 ZNF180Q9UJW8 692 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 TCRBV9S1A1TA0A576 114 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 IGHA2P01877 340 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 KRT3P12035 628 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 CPT1AP50416 773 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 SERPINB8P50452 374 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 CCNIQ14094 377 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 KCNA10Q16322 511 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 SLC4A11Q8NBS3 891 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 C7orf26Q96N11 449 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 C1orf21Q9H246 121 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 SPATA7Q9P0W8 599 aa16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 XPO7Q9UIA9 1087 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-201ENST00000268607 LSM8O95777 96 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ASGR1P07306 291 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 IL1R2P27930 398 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SERPINB6P35237 376 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 RPL22P35268 128 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ELK3P41970 407 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 NRLP54845 237 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 FOLH1Q04609 750 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PAOXQ6QHF9 649 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PDIK1LQ8N165 341 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 EFCAB3Q8N7B9 438 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 LINC01465Q8N7H1 131 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HEXIM2Q96MH2 286 aaKnown RBP16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GCNAQ96QF7 691 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC13A1Q9BZW2 595 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 BRD8Q9H0E9 1235 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 E7ESA3 106 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 TAF5Q15542 800 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC15A3Q8IY34 581 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 C12orf29Q8N999 325 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC35B2Q8TB61 432 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 FNDC8Q8TC99 324 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC44A1Q8WWI5 657 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HPDLQ96IR7 371 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PCDHGB4Q9UN71 923 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PCDHGB5Q9Y5G0 923 aa16.39■□□□□ 0.21
MAP1LC3B-201ENST00000268607 TRIM49D1C9J1S8 452 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ERBB2P04626 1255 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ZFXP17010 805 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CDKN2BP42772 138 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 YWHAGP61981 247 aaKnown RBP eCLIP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 BASP1P80723 227 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 BTKQ06187 659 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ACTL9Q8TC94 416 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SHCBP1LQ9BZQ2 653 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SRRDQ9UH36 339 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 KBTBD13C9JR72 458 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 M0QYV0 167 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 TPD52L2O43399 206 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 DUSP11O75319 330 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GRAP2O75791 330 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 IL18RAPO95256 599 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SERPINA6P08185 405 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CD48P09326 243 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 RAG1P15918 1043 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SLC5A2P31639 672 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HOXD12P35452 270 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 OTUD4Q01804 1114 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GSTM4Q03013 218 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PTPN11Q06124 597 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 RAB6CQ53S08 254 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GDF6Q6KF10 455 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ZCCHC23Q6ZST2 131 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 RAB6CQ9H0N0 254 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 RBM38Q9H0Z9 239 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CYP4F11Q9HBI6 524 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 HEMK1Q9Y5R4 338 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ANK1P16157 1881 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CAPN8A6NHC0 703 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 NDC80O14777 642 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 MICAL2O94851 1124 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 PPIDQ08752 370 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 CCDC92Q53HC0 331 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 MAP3K21Q5TCX8 1036 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 SH3PXD2AQ5TCZ1 1133 aa16.37■□□□□ 0.21
MAP1LC3B-201ENST00000268607 ATG16L1Q676U5 607 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms