RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 SP140LQ9H930 580 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 LAMC1P11047 1609 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 CHP2O43745 196 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 FARP2O94887 1054 aaPredicted RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 NEK3P51956 506 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 MARSP56192 900 aaKnown RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 EZH2Q15910 746 aaKnown RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 SWI5Q1ZZU3 235 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 ZNF621Q6ZSS3 439 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 R3HCC1LQ7Z5L2 792 aaKnown RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 EHD1Q9H4M9 534 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 DCXO43602 365 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 EYA4O95677 639 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 RARBP10826 455 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 RXRGP48443 463 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 REEP2Q9BRK0 252 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 KLHL28Q9NXS3 571 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 SLCO1B7G3V0H7 640 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 RBP1P09455 135 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 PHACTR4Q8IZ21 702 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 COMMD3-BMI1R4GMX3 469 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 NCAM1P13591 858 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 IFNGR2P38484 337 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 TIGD7Q6NT04 549 aaPredicted RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 CD3EAPO15446 510 aaKnown RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 NUDT14O95848 222 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 SERPINA3P01011 423 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 PRG2P13727 222 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 GEMP55040 296 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 TXNDC11Q6PKC3 985 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 C4orf22Q6V702 233 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 GMPPBQ9Y5P6 360 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 MYMKA6NI61 221 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 CES2O00748 559 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 KCNJ2P63252 427 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 MRNIPQ6NTE8 343 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
CHFR-201ENST00000266880 BTBD9Q96Q07 612 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 RNPEPL1Q9HAU8 725 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 IKZF3Q9UKT9 509 aa11.38□□□□□ -0.59
CHFR-201ENST00000266880 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 MTSS1O43312 755 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 EMC1Q8N766 993 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 SERAC1Q96JX3 654 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 C7orf25Q9BPX7 421 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 ZMYM5Q9UJ78 669 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 STX16-NPEPL1H3BU86 382 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 STX16O14662 325 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 EFNA5P52803 228 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 LDLRAP1Q5SW96 308 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 RAB43Q86YS6 212 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 ACAT2Q9BWD1 397 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 MARCH7Q9H992 704 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 SNX7Q9UNH6 387 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 ORC1Q13415 861 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 RFX4Q33E94 735 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 KLHDC7AQ5VTJ3 777 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 PLA2G4FQ68DD2 849 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 FAM20CQ8IXL6 584 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 GFM1Q96RP9 751 aaKnown RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 TMED5Q9Y3A6 229 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 DUSP10Q9Y6W6 482 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 MGRN1O60291 552 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 KCNH1O95259 989 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 PLA2G4EQ3MJ16 856 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 SLC9A4Q6AI14 798 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 DAW1Q8N136 415 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 USP7Q93009 1102 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 TTYH1Q9H313 450 aaPredicted RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 PNPLA3Q9NST1 481 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NCKIPSDQ9NZQ3 722 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 PTGFRNQ9P2B2 879 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 ZMPSTE24O75844 475 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NR1H2P55055 460 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 FOLH1Q04609 750 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NUDT18Q6ZVK8 323 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 MTSS1LQ765P7 747 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 DGCR14Q96DF8 476 aaKnown RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 FARSBQ9NSD9 589 aaKnown RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 MYCLP1P12525 358 aaPredicted RBP11.37□□□□□ -0.59
CHFR-201ENST00000266880 KLRC1P26715 233 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 TGM3Q08188 693 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 QRICH1Q2TAL8 776 aa11.37□□□□□ -0.59
CHFR-201ENST00000266880 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms