RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ATP6V1E1P36543 226 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 ITGA9Q13797 1035 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 GRTP1Q5TC63 336 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 CACHD1Q5VU97 1274 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 C16orf59Q7L2K0 433 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 TMEM199Q8N511 208 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 TSEN2Q8NCE0 465 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 LENG9Q96B70 501 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 MBOAT7Q96N66 472 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 OLFM3Q96PB7 478 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PCDHB18PQ96TA0 734 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 GMLQ99445 158 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 UNKQ9C0B0 810 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 CCDC134Q9H6E4 229 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 LRRC19Q9H756 370 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 UBA2Q9UBT2 640 aaPredicted RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 A0A0A0MRY4 1105 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 COL1A1P02452 1464 aaPredicted RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 ETS1P14921 441 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SKOR1P84550 965 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 OCA2Q04671 838 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 MMRN1Q13201 1228 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SPDYCQ5MJ68 293 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 RAP1GAP2Q684P5 730 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 FAM35AQ86V20 835 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SPATA13Q96N96 652 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 NMRK1Q9NWW6 199 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SASH3O75995 380 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SEC24DO94855 1032 aaPredicted RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 HDCP19113 662 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SERPINB5P36952 375 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 MTDHQ86UE4 582 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 C1orf127Q8N9H9 656 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SRPK1Q96SB4 655 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 THUMPD3Q9BV44 507 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 HIPK3Q9H422 1215 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 PRDM12Q9H4Q4 367 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SEPT3Q9UH03 358 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 GOLGA8TH3BQL2 631 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 RBAK-RBAKDNI3L0D1 243 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 TRDMT1O14717 391 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 FGF10O15520 208 aaPredicted RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 LIASO43766 372 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 DDHD2O94830 711 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 MPOP05164 745 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 MMP8P22894 467 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 DDR2Q16832 855 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 USP41Q3LFD5 358 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 PTPN20Q4JDL3 420 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 TPGS1Q6ZTW0 290 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 PDZD7Q9H5P4 517 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 TRIM13O60858 407 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 C4BPAP04003 597 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 DRG2P55039 364 aaKnown RBP15.74■□□□□ 0.11
TIMP3-201ENST00000266085 TAS2R40P59535 323 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 BTKQ06187 659 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 KLC1Q07866 573 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SLC22A9Q8IVM8 553 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 CEP70Q8NHQ1 597 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 ALG3Q92685 438 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 APOPT1Q96IL0 206 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 C17orf80Q9BSJ5 609 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SYNDIG1Q9H7V2 258 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 NRDE2Q9H7Z3 1164 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 ETNK2Q9NVF9 386 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 MYO9BQ13459 2157 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 MMP13P45452 471 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 JOSD2Q8TAC2 188 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 DNAJC9Q8WXX5 260 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 B3GNT5Q9BYG0 378 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 DERAQ9Y315 318 aa15.74■□□□□ 0.11
TIMP3-201ENST00000266085 SEPT4O43236 478 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 SYNCRIPO60506 623 aaKnown RBP15.73■□□□□ 0.11
TIMP3-201ENST00000266085 TSPAN1O60635 241 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 MATKP42679 507 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 ARL4DP49703 201 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 ILF2Q12905 390 aaKnown RBP15.73■□□□□ 0.11
TIMP3-201ENST00000266085 RASA2Q15283 850 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 FAM162AQ96A26 154 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CPNE1Q99829 537 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 TMEM120AQ9BXJ8 343 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 DUSP16Q9BY84 665 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 POLR1EQ9GZS1 481 aaKnown RBP15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CNGB3Q9NQW8 809 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 TMEM161AQ9NX61 479 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CNTNAP1P78357 1384 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CARNS1A5YM72 827 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 NOL4O94818 638 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 FAAP100Q0VG06 881 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 YIPF3Q9GZM5 350 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 TAS2R13Q9NYV9 303 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 E9PBE3 544 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 KLHL41O60662 606 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 SERPINE1P05121 402 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CSH1P0DML2 217 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CSH2P0DML3 217 aa15.73■□□□□ 0.11
TIMP3-201ENST00000266085 CALB2P22676 271 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms