RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 GSCP56915 257 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 RNASE9P60153 205 aaKnown RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 ZBTB16Q05516 673 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 LMAN2Q12907 356 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 NME3Q13232 169 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 CDH18Q13634 790 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 AUHQ13825 339 aaKnown RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 RSPO4Q2I0M5 234 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 FSCBQ5H9T9 825 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 RABGAP1LQ5R372 815 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 FAM102AQ5T9C2 384 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 OTUD1Q5VV17 481 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 SERPINA13PQ6UXR4 307 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
POLB-201ENST00000265421 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 PHF13Q86YI8 300 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 CFAP52Q8N1V2 620 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 CARNMT1Q8N4J0 409 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 FRMD1Q8N878 549 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 OR2T3Q8NH03 318 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 SLC20A1Q8WUM9 679 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 ZNF419Q96HQ0 510 aaPredicted RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 RTKNQ9BST9 563 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 EDEM3Q9BZQ6 932 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 PRDM16Q9HAZ2 1276 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 PIGVQ9NUD9 493 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 USP36Q9P275 1121 aaKnown RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 HS3ST4Q9Y661 456 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.42□□□□□ -0.58
POLB-201ENST00000265421 DENND4CQ5VZ89 1909 aa11.42□□□□□ -0.58
POLB-201ENST00000265421 A0A1B0GTH6 734 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 A0A1B0GVM2 712 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 TCAF2A6NFQ2 919 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 DRGXA6NNA5 263 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 H0Y626 953 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 SLC30A4O14863 429 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PAGE1O75459 146 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 CLDN11O75508 207 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 MOCS3O95396 460 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 EPHX1P07099 455 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 SRPRAP08240 638 aaKnown RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 FERP16591 822 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 FLT3P36888 993 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 CREB5Q02930 508 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 CENPCQ03188 943 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 DEUP1Q05D60 604 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 SULT2A1Q06520 285 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PTP4A2Q12974 167 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 NR1I3Q14994 352 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PLEKHG6Q3KR16 790 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PITRM1Q5JRX3 1037 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PEAR1Q5VY43 1037 aaPredicted RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 SYT12Q8IV01 421 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 CCAR2Q8N163 923 aaKnown RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 CADM4Q8NFZ8 388 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 CYB5D2Q8WUJ1 264 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PRCCQ92733 491 aaPredicted RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 SIPA1Q96FS4 1042 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 MYO19Q96H55 970 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 MRGPRX3Q96LB0 322 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 HAPLN3Q96S86 360 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 AGPAT1Q99943 283 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 ADAM33Q9BZ11 813 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 TKTL2Q9H0I9 626 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PRSS16Q9NQE7 514 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 EVLQ9UI08 416 aaPredicted RBP11.41□□□□□ -0.58
POLB-201ENST00000265421 TBC1D30Q9Y2I9 924 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 FAM186AA6NE01 2351 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 PATJQ8NI35 1801 aa11.41□□□□□ -0.58
POLB-201ENST00000265421 CFAP54Q96N23 3096 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 SYNJ2BP-COX16A0A087WUM0 186 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 TARSL2A2RTX5 802 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 TM4SF5O14894 197 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 ADCY5O95622 1261 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 TFE3P19532 575 aaPredicted RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 CD6P30203 668 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 RDXP35241 583 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 CSKP41240 450 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 PTGER3P43115 390 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 DHPSP49366 369 aaPredicted RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 SULT1E1P49888 294 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 CDH4P55283 916 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 ST8SIA6P61647 398 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 RPL6Q02878 288 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 CLEC16AQ2KHT3 1053 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 SKOR2Q2VWA4 1001 aaPredicted RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 HNRNPA1L2Q32P51 320 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 FNDC3BQ53EP0 1204 aaKnown RBP11.4□□□□□ -0.58
POLB-201ENST00000265421 C2CD6Q53TS8 623 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 PPP1R2P3Q6NXS1 205 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 MMS22LQ6ZRQ5 1243 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 CYP2U1Q7Z449 544 aa11.4□□□□□ -0.58
POLB-201ENST00000265421 TMEFF1Q8IYR6 380 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms